Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.27■□□□□ 0.84
Raet1eQ9CZQ6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Raet1eQ9CZQ6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.27■□□□□ 0.84
Raet1eQ9CZQ6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1eQ9CZQ6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raet1eQ9CZQ6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Raet1eQ9CZQ6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1eQ9CZQ6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.24■□□□□ 0.83
Raet1eQ9CZQ6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1eQ9CZQ6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Raet1eQ9CZQ6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.23■□□□□ 0.83
Raet1eQ9CZQ6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1eQ9CZQ6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1eQ9CZQ6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1eQ9CZQ6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1eQ9CZQ6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1eQ9CZQ6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1eQ9CZQ6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Raet1eQ9CZQ6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Gm16148-201ENSMUST00000119653 893 ntBASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1eQ9CZQ6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Raet1eQ9CZQ6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Raet1eQ9CZQ6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Raet1eQ9CZQ6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Raet1eQ9CZQ6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1eQ9CZQ6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1eQ9CZQ6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1eQ9CZQ6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Raet1eQ9CZQ6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1eQ9CZQ6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1eQ9CZQ6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1eQ9CZQ6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1eQ9CZQ6 Gm8109-201ENSMUST00000194076 746 ntBASIC20.14■□□□□ 0.81
Raet1eQ9CZQ6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1eQ9CZQ6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1eQ9CZQ6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Raet1eQ9CZQ6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1eQ9CZQ6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1eQ9CZQ6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Raet1eQ9CZQ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1eQ9CZQ6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Raet1eQ9CZQ6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Raet1eQ9CZQ6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1eQ9CZQ6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1eQ9CZQ6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1eQ9CZQ6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1eQ9CZQ6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raet1eQ9CZQ6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms