Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx6-1Q99MA9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx6-1Q99MA9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Nkx6-1Q99MA9 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.86■■□□□ 1.09
Nkx6-1Q99MA9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx6-1Q99MA9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Nkx6-1Q99MA9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nkx6-1Q99MA9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx6-1Q99MA9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Nkx6-1Q99MA9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.84■■□□□ 1.09
Nkx6-1Q99MA9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkx6-1Q99MA9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Nkx6-1Q99MA9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkx6-1Q99MA9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Nkx6-1Q99MA9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx6-1Q99MA9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nkx6-1Q99MA9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx6-1Q99MA9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nkx6-1Q99MA9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.81■■□□□ 1.08
Nkx6-1Q99MA9 Terc-201ENSMUST00000082862 423 ntBASIC21.81■■□□□ 1.08
Nkx6-1Q99MA9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Nkx6-1Q99MA9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Nkx6-1Q99MA9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx6-1Q99MA9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.8■■□□□ 1.08
Nkx6-1Q99MA9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkx6-1Q99MA9 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.79■■□□□ 1.08
Nkx6-1Q99MA9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Nkx6-1Q99MA9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Nkx6-1Q99MA9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx6-1Q99MA9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.78■■□□□ 1.08
Nkx6-1Q99MA9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx6-1Q99MA9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx6-1Q99MA9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.77■■□□□ 1.08
Nkx6-1Q99MA9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx6-1Q99MA9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx6-1Q99MA9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.76■■□□□ 1.07
Nkx6-1Q99MA9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nkx6-1Q99MA9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.76■■□□□ 1.07
Nkx6-1Q99MA9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx6-1Q99MA9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx6-1Q99MA9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx6-1Q99MA9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx6-1Q99MA9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx6-1Q99MA9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.73■■□□□ 1.07
Nkx6-1Q99MA9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx6-1Q99MA9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkx6-1Q99MA9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Nkx6-1Q99MA9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx6-1Q99MA9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.72■■□□□ 1.07
Nkx6-1Q99MA9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.72■■□□□ 1.07
Nkx6-1Q99MA9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx6-1Q99MA9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx6-1Q99MA9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.71■■□□□ 1.07
Nkx6-1Q99MA9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Rps24-207ENSMUST00000224568 714 ntBASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx6-1Q99MA9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx6-1Q99MA9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx6-1Q99MA9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx6-1Q99MA9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nkx6-1Q99MA9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Nkx6-1Q99MA9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.68■■□□□ 1.06
Nkx6-1Q99MA9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx6-1Q99MA9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.68■■□□□ 1.06
Nkx6-1Q99MA9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nkx6-1Q99MA9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx6-1Q99MA9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Nkx6-1Q99MA9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Nkx6-1Q99MA9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx6-1Q99MA9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx6-1Q99MA9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx6-1Q99MA9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx6-1Q99MA9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx6-1Q99MA9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkx6-1Q99MA9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Nkx6-1Q99MA9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx6-1Q99MA9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.64■■□□□ 1.05
Nkx6-1Q99MA9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx6-1Q99MA9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.63■■□□□ 1.05
Nkx6-1Q99MA9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx6-1Q99MA9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx6-1Q99MA9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms