Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac1Q91Y10 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhac1Q91Y10 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdhac1Q91Y10 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhac1Q91Y10 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdhac1Q91Y10 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhac1Q91Y10 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac1Q91Y10 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac1Q91Y10 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac1Q91Y10 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac1Q91Y10 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhac1Q91Y10 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhac1Q91Y10 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdhac1Q91Y10 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhac1Q91Y10 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac1Q91Y10 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhac1Q91Y10 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac1Q91Y10 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac1Q91Y10 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac1Q91Y10 Particl-201ENSMUST00000205370 1560 ntBASIC21.3■■□□□ 1
Pcdhac1Q91Y10 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhac1Q91Y10 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhac1Q91Y10 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhac1Q91Y10 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.28■■□□□ 1
Pcdhac1Q91Y10 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhac1Q91Y10 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhac1Q91Y10 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhac1Q91Y10 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhac1Q91Y10 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhac1Q91Y10 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdhac1Q91Y10 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhac1Q91Y10 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.26■□□□□ 0.99
Pcdhac1Q91Y10 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhac1Q91Y10 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhac1Q91Y10 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhac1Q91Y10 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhac1Q91Y10 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhac1Q91Y10 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhac1Q91Y10 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhac1Q91Y10 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhac1Q91Y10 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhac1Q91Y10 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhac1Q91Y10 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhac1Q91Y10 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhac1Q91Y10 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhac1Q91Y10 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhac1Q91Y10 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhac1Q91Y10 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhac1Q91Y10 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhac1Q91Y10 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhac1Q91Y10 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.21■□□□□ 0.99
Pcdhac1Q91Y10 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhac1Q91Y10 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhac1Q91Y10 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhac1Q91Y10 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhac1Q91Y10 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhac1Q91Y10 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhac1Q91Y10 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhac1Q91Y10 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhac1Q91Y10 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhac1Q91Y10 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhac1Q91Y10 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhac1Q91Y10 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhac1Q91Y10 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhac1Q91Y10 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhac1Q91Y10 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhac1Q91Y10 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhac1Q91Y10 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.14■□□□□ 0.98
Pcdhac1Q91Y10 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Pcdhac1Q91Y10 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhac1Q91Y10 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pcdhac1Q91Y10 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhac1Q91Y10 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhac1Q91Y10 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhac1Q91Y10 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhac1Q91Y10 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdhac1Q91Y10 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhac1Q91Y10 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms