Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhga9Q91XX9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhga9Q91XX9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhga9Q91XX9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhga9Q91XX9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga9Q91XX9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga9Q91XX9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga9Q91XX9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhga9Q91XX9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga9Q91XX9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga9Q91XX9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga9Q91XX9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga9Q91XX9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhga9Q91XX9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhga9Q91XX9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.64■■□□□ 1.21
Pcdhga9Q91XX9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhga9Q91XX9 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.64■■□□□ 1.21
Pcdhga9Q91XX9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga9Q91XX9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga9Q91XX9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga9Q91XX9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga9Q91XX9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.62■■□□□ 1.21
Pcdhga9Q91XX9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhga9Q91XX9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga9Q91XX9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.61■■□□□ 1.21
Pcdhga9Q91XX9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga9Q91XX9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga9Q91XX9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga9Q91XX9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga9Q91XX9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhga9Q91XX9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.59■■□□□ 1.21
Pcdhga9Q91XX9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhga9Q91XX9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhga9Q91XX9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.58■■□□□ 1.21
Pcdhga9Q91XX9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.58■■□□□ 1.21
Pcdhga9Q91XX9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhga9Q91XX9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdhga9Q91XX9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga9Q91XX9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pcdhga9Q91XX9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhga9Q91XX9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.56■■□□□ 1.2
Pcdhga9Q91XX9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Pcdhga9Q91XX9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga9Q91XX9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga9Q91XX9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga9Q91XX9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga9Q91XX9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga9Q91XX9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga9Q91XX9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga9Q91XX9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga9Q91XX9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Pcdhga9Q91XX9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga9Q91XX9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga9Q91XX9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga9Q91XX9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhga9Q91XX9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga9Q91XX9 Cap2-205ENSMUST00000225824 1634 ntBASIC22.49■■□□□ 1.19
Pcdhga9Q91XX9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.49■■□□□ 1.19
Pcdhga9Q91XX9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga9Q91XX9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga9Q91XX9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga9Q91XX9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga9Q91XX9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga9Q91XX9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga9Q91XX9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga9Q91XX9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms