Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdhb17Q91VD8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Pcdhb17Q91VD8 Gm45364-201ENSMUST00000210883 159 ntBASIC23.82■■□□□ 1.4
Pcdhb17Q91VD8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Pcdhb17Q91VD8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Pcdhb17Q91VD8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb17Q91VD8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb17Q91VD8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb17Q91VD8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb17Q91VD8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb17Q91VD8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb17Q91VD8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb17Q91VD8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.79■■□□□ 1.4
Pcdhb17Q91VD8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb17Q91VD8 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.79■■□□□ 1.4
Pcdhb17Q91VD8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb17Q91VD8 Gm9812-201ENSMUST00000061934 968 ntBASIC23.78■■□□□ 1.4
Pcdhb17Q91VD8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb17Q91VD8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhb17Q91VD8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb17Q91VD8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.77■■□□□ 1.4
Pcdhb17Q91VD8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Pcdhb17Q91VD8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdhb17Q91VD8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdhb17Q91VD8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb17Q91VD8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb17Q91VD8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Pcdhb17Q91VD8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb17Q91VD8 Gm6311-201ENSMUST00000073790 878 ntBASIC23.74■■□□□ 1.39
Pcdhb17Q91VD8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb17Q91VD8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb17Q91VD8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Pcdhb17Q91VD8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb17Q91VD8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.73■■□□□ 1.39
Pcdhb17Q91VD8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.73■■□□□ 1.39
Pcdhb17Q91VD8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pcdhb17Q91VD8 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.72■■□□□ 1.39
Pcdhb17Q91VD8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb17Q91VD8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb17Q91VD8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb17Q91VD8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb17Q91VD8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb17Q91VD8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb17Q91VD8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb17Q91VD8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb17Q91VD8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb17Q91VD8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb17Q91VD8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb17Q91VD8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.68■■□□□ 1.38
Pcdhb17Q91VD8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb17Q91VD8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb17Q91VD8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb17Q91VD8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Pcdhb17Q91VD8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb17Q91VD8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb17Q91VD8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb17Q91VD8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb17Q91VD8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb17Q91VD8 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.65■■□□□ 1.38
Pcdhb17Q91VD8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb17Q91VD8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb17Q91VD8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Pcdhb17Q91VD8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Pcdhb17Q91VD8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhb17Q91VD8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb17Q91VD8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb17Q91VD8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb17Q91VD8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb17Q91VD8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb17Q91VD8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb17Q91VD8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb17Q91VD8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdhb17Q91VD8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb17Q91VD8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb17Q91VD8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb17Q91VD8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb17Q91VD8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb17Q91VD8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.61■■□□□ 1.37
Pcdhb17Q91VD8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.61■■□□□ 1.37
Pcdhb17Q91VD8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb17Q91VD8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb17Q91VD8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb17Q91VD8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhb17Q91VD8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.58■■□□□ 1.37
Pcdhb17Q91VD8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Pcdhb17Q91VD8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.58■■□□□ 1.36
Pcdhb17Q91VD8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb17Q91VD8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb17Q91VD8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb17Q91VD8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb17Q91VD8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb17Q91VD8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb17Q91VD8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb17Q91VD8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms