Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sh3kbp1Q8R550 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Sh3kbp1Q8R550 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Sh3kbp1Q8R550 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sh3kbp1Q8R550 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Gm4799-201ENSMUST00000095396 657 ntBASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sh3kbp1Q8R550 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Sh3kbp1Q8R550 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sh3kbp1Q8R550 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sh3kbp1Q8R550 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Gm37136-201ENSMUST00000194368 194 ntBASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Sh3kbp1Q8R550 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Gm9806-201ENSMUST00000051080 552 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sh3kbp1Q8R550 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sh3kbp1Q8R550 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.51■■□□□ 1.35
Sh3kbp1Q8R550 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Mir3960-201ENSMUST00000198213 73 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Gm16437-201ENSMUST00000025669 507 ntBASIC23.5■■□□□ 1.35
Sh3kbp1Q8R550 Gm11687-201ENSMUST00000118911 886 ntBASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gm45364-201ENSMUST00000210883 159 ntBASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
Sh3kbp1Q8R550 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.48■■□□□ 1.35
Sh3kbp1Q8R550 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Sh3kbp1Q8R550 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sh3kbp1Q8R550 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Sh3kbp1Q8R550 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.45■■□□□ 1.34
Sh3kbp1Q8R550 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3kbp1Q8R550 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sh3kbp1Q8R550 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3kbp1Q8R550 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3kbp1Q8R550 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Sh3kbp1Q8R550 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3kbp1Q8R550 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Sh3kbp1Q8R550 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3kbp1Q8R550 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm12366-201ENSMUST00000121722 873 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm5786-201ENSMUST00000085368 882 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.39■■□□□ 1.33
Sh3kbp1Q8R550 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3kbp1Q8R550 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3kbp1Q8R550 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3kbp1Q8R550 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3kbp1Q8R550 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms