Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Chrna3Q8R4G9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Chrna3Q8R4G9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.52■■□□□ 1.2
Chrna3Q8R4G9 Mir6538-201ENSMUST00000183713 110 ntBASIC22.52■■□□□ 1.2
Chrna3Q8R4G9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.52■■□□□ 1.2
Chrna3Q8R4G9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Chrna3Q8R4G9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chrna3Q8R4G9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Chrna3Q8R4G9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Chrna3Q8R4G9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Chrna3Q8R4G9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Chrna3Q8R4G9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chrna3Q8R4G9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Chrna3Q8R4G9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.46■■□□□ 1.19
Chrna3Q8R4G9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Chrna3Q8R4G9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.46■■□□□ 1.19
Chrna3Q8R4G9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Chrna3Q8R4G9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Chrna3Q8R4G9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Gm11687-201ENSMUST00000118911 886 ntBASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Gm16437-201ENSMUST00000025669 507 ntBASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Chrna3Q8R4G9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Chrna3Q8R4G9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Chrna3Q8R4G9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Chrna3Q8R4G9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Chrna3Q8R4G9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.43■■□□□ 1.18
Chrna3Q8R4G9 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.42■■□□□ 1.18
Chrna3Q8R4G9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Chrna3Q8R4G9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Chrna3Q8R4G9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.4■■□□□ 1.18
Chrna3Q8R4G9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Chrna3Q8R4G9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chrna3Q8R4G9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Chrna3Q8R4G9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Chrna3Q8R4G9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Chrna3Q8R4G9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Chrna3Q8R4G9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.39■■□□□ 1.18
Chrna3Q8R4G9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chrna3Q8R4G9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Chrna3Q8R4G9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Chrna3Q8R4G9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Chrna3Q8R4G9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Chrna3Q8R4G9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Chrna3Q8R4G9 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.37■■□□□ 1.17
Chrna3Q8R4G9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Chrna3Q8R4G9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Chrna3Q8R4G9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chrna3Q8R4G9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chrna3Q8R4G9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Chrna3Q8R4G9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Chrna3Q8R4G9 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.35■■□□□ 1.17
Chrna3Q8R4G9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Chrna3Q8R4G9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.35■■□□□ 1.17
Chrna3Q8R4G9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Chrna3Q8R4G9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chrna3Q8R4G9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.34■■□□□ 1.17
Chrna3Q8R4G9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chrna3Q8R4G9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chrna3Q8R4G9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Chrna3Q8R4G9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chrna3Q8R4G9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Chrna3Q8R4G9 Terc-201ENSMUST00000082862 423 ntBASIC22.32■■□□□ 1.16
Chrna3Q8R4G9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Chrna3Q8R4G9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chrna3Q8R4G9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chrna3Q8R4G9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Chrna3Q8R4G9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Chrna3Q8R4G9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Chrna3Q8R4G9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.3■■□□□ 1.16
Chrna3Q8R4G9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.3■■□□□ 1.16
Chrna3Q8R4G9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Chrna3Q8R4G9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Chrna3Q8R4G9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Chrna3Q8R4G9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.29■■□□□ 1.16
Chrna3Q8R4G9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms