Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cd109Q8R422 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC33.6■■■□□ 2.97
Cd109Q8R422 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Cd109Q8R422 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
Cd109Q8R422 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Cd109Q8R422 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
Cd109Q8R422 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Cd109Q8R422 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
Cd109Q8R422 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC33.58■■■□□ 2.97
Cd109Q8R422 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cd109Q8R422 AC153911.1-201ENSMUST00000220378 758 ntBASIC33.57■■■□□ 2.96
Cd109Q8R422 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.96
Cd109Q8R422 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Cd109Q8R422 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC33.55■■■□□ 2.96
Cd109Q8R422 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Cd109Q8R422 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Cd109Q8R422 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Cd109Q8R422 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cd109Q8R422 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cd109Q8R422 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cd109Q8R422 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC33.53■■■□□ 2.96
Cd109Q8R422 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC33.53■■■□□ 2.96
Cd109Q8R422 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Cd109Q8R422 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
Cd109Q8R422 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Cd109Q8R422 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Cd109Q8R422 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Cd109Q8R422 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC33.5■■■□□ 2.95
Cd109Q8R422 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Cd109Q8R422 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Cd109Q8R422 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC33.49■■■□□ 2.95
Cd109Q8R422 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC33.49■■■□□ 2.95
Cd109Q8R422 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Cd109Q8R422 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Cd109Q8R422 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC33.48■■■□□ 2.95
Cd109Q8R422 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Cd109Q8R422 Terc-201ENSMUST00000082862 423 ntBASIC33.47■■■□□ 2.95
Cd109Q8R422 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Cd109Q8R422 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Cd109Q8R422 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cd109Q8R422 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC33.45■■■□□ 2.95
Cd109Q8R422 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Cd109Q8R422 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Cd109Q8R422 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC33.45■■■□□ 2.94
Cd109Q8R422 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC33.44■■■□□ 2.94
Cd109Q8R422 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC33.44■■■□□ 2.94
Cd109Q8R422 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Cd109Q8R422 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC33.42■■■□□ 2.94
Cd109Q8R422 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
Cd109Q8R422 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cd109Q8R422 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Cd109Q8R422 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
Cd109Q8R422 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cd109Q8R422 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC33.38■■■□□ 2.93
Cd109Q8R422 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Cd109Q8R422 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Cd109Q8R422 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
Cd109Q8R422 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC33.36■■■□□ 2.93
Cd109Q8R422 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cd109Q8R422 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Cd109Q8R422 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cd109Q8R422 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cd109Q8R422 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC33.34■■■□□ 2.93
Cd109Q8R422 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
Cd109Q8R422 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Cd109Q8R422 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC33.32■■■□□ 2.92
Cd109Q8R422 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Cd109Q8R422 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Cd109Q8R422 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC33.32■■■□□ 2.92
Cd109Q8R422 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Cd109Q8R422 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Cd109Q8R422 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Cd109Q8R422 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC33.3■■■□□ 2.92
Cd109Q8R422 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Cd109Q8R422 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
Cd109Q8R422 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC33.29■■■□□ 2.92
Cd109Q8R422 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Cd109Q8R422 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cd109Q8R422 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cd109Q8R422 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC33.28■■■□□ 2.92
Cd109Q8R422 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cd109Q8R422 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Cd109Q8R422 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Cd109Q8R422 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC33.27■■■□□ 2.92
Cd109Q8R422 Gm10420-201ENSMUST00000121713 882 ntBASIC33.26■■■□□ 2.91
Cd109Q8R422 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Cd109Q8R422 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cd109Q8R422 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Cd109Q8R422 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cd109Q8R422 Gm5067-201ENSMUST00000170449 1009 ntBASIC33.24■■■□□ 2.91
Cd109Q8R422 Gm4419-202ENSMUST00000226239 1431 ntBASIC33.24■■■□□ 2.91
Cd109Q8R422 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Cd109Q8R422 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC33.23■■■□□ 2.91
Cd109Q8R422 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Cd109Q8R422 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cd109Q8R422 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cd109Q8R422 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Cd109Q8R422 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC33.19■■■□□ 2.9
Cd109Q8R422 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Cd109Q8R422 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms