Protein–RNA interactions for Protein: Q8R1M0

Hmces, Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein, mousemouse

Known RBP Predictions only

Length 353 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmcesQ8R1M0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
HmcesQ8R1M0 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.16■■■□□ 2.26
HmcesQ8R1M0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
HmcesQ8R1M0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.15■■■□□ 2.26
HmcesQ8R1M0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HmcesQ8R1M0 Zxda-201ENSMUST00000117281 2621 ntBASIC29.14■■■□□ 2.26
HmcesQ8R1M0 Gm22567-201ENSMUST00000175542 342 ntBASIC29.13■■■□□ 2.25
HmcesQ8R1M0 Terc-201ENSMUST00000082862 423 ntBASIC29.13■■■□□ 2.25
HmcesQ8R1M0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HmcesQ8R1M0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HmcesQ8R1M0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC29.12■■■□□ 2.25
HmcesQ8R1M0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
HmcesQ8R1M0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HmcesQ8R1M0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HmcesQ8R1M0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HmcesQ8R1M0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
HmcesQ8R1M0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.1■■■□□ 2.25
HmcesQ8R1M0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
HmcesQ8R1M0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29.09■■■□□ 2.25
HmcesQ8R1M0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC29.09■■■□□ 2.25
HmcesQ8R1M0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
HmcesQ8R1M0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
HmcesQ8R1M0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
HmcesQ8R1M0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC29.07■■■□□ 2.24
HmcesQ8R1M0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
HmcesQ8R1M0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
HmcesQ8R1M0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
HmcesQ8R1M0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
HmcesQ8R1M0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
HmcesQ8R1M0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.05■■■□□ 2.24
HmcesQ8R1M0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
HmcesQ8R1M0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
HmcesQ8R1M0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
HmcesQ8R1M0 Gm14121-201ENSMUST00000121441 1380 ntBASIC29.03■■■□□ 2.24
HmcesQ8R1M0 Gm15039-201ENSMUST00000118914 875 ntBASIC29.03■■■□□ 2.24
HmcesQ8R1M0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
HmcesQ8R1M0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
HmcesQ8R1M0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
HmcesQ8R1M0 Gm15546-201ENSMUST00000122095 826 ntBASIC29■■■□□ 2.23
HmcesQ8R1M0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC29■■■□□ 2.23
HmcesQ8R1M0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
HmcesQ8R1M0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
HmcesQ8R1M0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HmcesQ8R1M0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HmcesQ8R1M0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
HmcesQ8R1M0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
HmcesQ8R1M0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.97■■■□□ 2.23
HmcesQ8R1M0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.97■■■□□ 2.23
HmcesQ8R1M0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
HmcesQ8R1M0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
HmcesQ8R1M0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.22
HmcesQ8R1M0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
HmcesQ8R1M0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
HmcesQ8R1M0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
HmcesQ8R1M0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
HmcesQ8R1M0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
HmcesQ8R1M0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.92■■■□□ 2.22
HmcesQ8R1M0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
HmcesQ8R1M0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
HmcesQ8R1M0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
HmcesQ8R1M0 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.91■■■□□ 2.22
HmcesQ8R1M0 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.91■■■□□ 2.22
HmcesQ8R1M0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HmcesQ8R1M0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
HmcesQ8R1M0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HmcesQ8R1M0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HmcesQ8R1M0 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.89■■■□□ 2.22
HmcesQ8R1M0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.89■■■□□ 2.22
HmcesQ8R1M0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC28.89■■■□□ 2.22
HmcesQ8R1M0 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.89■■■□□ 2.22
HmcesQ8R1M0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HmcesQ8R1M0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.89■■■□□ 2.21
HmcesQ8R1M0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
HmcesQ8R1M0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
HmcesQ8R1M0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.87■■■□□ 2.21
HmcesQ8R1M0 Gm44428-201ENSMUST00000204474 874 ntBASIC28.86■■■□□ 2.21
HmcesQ8R1M0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
HmcesQ8R1M0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HmcesQ8R1M0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HmcesQ8R1M0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
HmcesQ8R1M0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
HmcesQ8R1M0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
HmcesQ8R1M0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.84■■■□□ 2.21
HmcesQ8R1M0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.84■■■□□ 2.21
HmcesQ8R1M0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.84■■■□□ 2.21
HmcesQ8R1M0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HmcesQ8R1M0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HmcesQ8R1M0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
HmcesQ8R1M0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HmcesQ8R1M0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
HmcesQ8R1M0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
HmcesQ8R1M0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
HmcesQ8R1M0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HmcesQ8R1M0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
HmcesQ8R1M0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HmcesQ8R1M0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.81■■■□□ 2.2
HmcesQ8R1M0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HmcesQ8R1M0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HmcesQ8R1M0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HmcesQ8R1M0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms