Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Vopp1Q8R1C3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Vopp1Q8R1C3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Vopp1Q8R1C3 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.13■■□□□ 1.61
Vopp1Q8R1C3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vopp1Q8R1C3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vopp1Q8R1C3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vopp1Q8R1C3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.11■■□□□ 1.61
Vopp1Q8R1C3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vopp1Q8R1C3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vopp1Q8R1C3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Vopp1Q8R1C3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vopp1Q8R1C3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Vopp1Q8R1C3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Vopp1Q8R1C3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Vopp1Q8R1C3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Vopp1Q8R1C3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
Vopp1Q8R1C3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Vopp1Q8R1C3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Vopp1Q8R1C3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vopp1Q8R1C3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vopp1Q8R1C3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vopp1Q8R1C3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
Vopp1Q8R1C3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Vopp1Q8R1C3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Vopp1Q8R1C3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vopp1Q8R1C3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Vopp1Q8R1C3 Gm14523-201ENSMUST00000117260 558 ntBASIC25.05■■□□□ 1.6
Vopp1Q8R1C3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.05■■□□□ 1.6
Vopp1Q8R1C3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Vopp1Q8R1C3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.05■■□□□ 1.6
Vopp1Q8R1C3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vopp1Q8R1C3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.04■■□□□ 1.6
Vopp1Q8R1C3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Vopp1Q8R1C3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.04■■□□□ 1.6
Vopp1Q8R1C3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Vopp1Q8R1C3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vopp1Q8R1C3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Vopp1Q8R1C3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.03■■□□□ 1.6
Vopp1Q8R1C3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Vopp1Q8R1C3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vopp1Q8R1C3 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.02■■□□□ 1.6
Vopp1Q8R1C3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.01■■□□□ 1.59
Vopp1Q8R1C3 Terc-201ENSMUST00000082862 423 ntBASIC25.01■■□□□ 1.59
Vopp1Q8R1C3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Vopp1Q8R1C3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Vopp1Q8R1C3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vopp1Q8R1C3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25■■□□□ 1.59
Vopp1Q8R1C3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Vopp1Q8R1C3 Gm4419-202ENSMUST00000226239 1431 ntBASIC25■■□□□ 1.59
Vopp1Q8R1C3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vopp1Q8R1C3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Vopp1Q8R1C3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Vopp1Q8R1C3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.97■■□□□ 1.59
Vopp1Q8R1C3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vopp1Q8R1C3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vopp1Q8R1C3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Vopp1Q8R1C3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vopp1Q8R1C3 Gm7332-201ENSMUST00000118351 454 ntBASIC24.96■■□□□ 1.59
Vopp1Q8R1C3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.96■■□□□ 1.59
Vopp1Q8R1C3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Vopp1Q8R1C3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Vopp1Q8R1C3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Vopp1Q8R1C3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Vopp1Q8R1C3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Vopp1Q8R1C3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Vopp1Q8R1C3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.94■■□□□ 1.58
Vopp1Q8R1C3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Vopp1Q8R1C3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Vopp1Q8R1C3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Vopp1Q8R1C3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Vopp1Q8R1C3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vopp1Q8R1C3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vopp1Q8R1C3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.93■■□□□ 1.58
Vopp1Q8R1C3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vopp1Q8R1C3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vopp1Q8R1C3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vopp1Q8R1C3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.89■■□□□ 1.58
Vopp1Q8R1C3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms