Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cnot3Q8K0V4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Cnot3Q8K0V4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot3Q8K0V4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot3Q8K0V4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cnot3Q8K0V4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.47■■□□□ 1.03
Cnot3Q8K0V4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cnot3Q8K0V4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cnot3Q8K0V4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cnot3Q8K0V4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cnot3Q8K0V4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.46■■□□□ 1.03
Cnot3Q8K0V4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cnot3Q8K0V4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot3Q8K0V4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot3Q8K0V4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cnot3Q8K0V4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cnot3Q8K0V4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Cnot3Q8K0V4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.42■■□□□ 1.02
Cnot3Q8K0V4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Cnot3Q8K0V4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Cnot3Q8K0V4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cnot3Q8K0V4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot3Q8K0V4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot3Q8K0V4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot3Q8K0V4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.41■■□□□ 1.02
Cnot3Q8K0V4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cnot3Q8K0V4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnot3Q8K0V4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnot3Q8K0V4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cnot3Q8K0V4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cnot3Q8K0V4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnot3Q8K0V4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnot3Q8K0V4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cnot3Q8K0V4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cnot3Q8K0V4 Gm30023-201ENSMUST00000197970 889 ntBASIC21.39■■□□□ 1.01
Cnot3Q8K0V4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.39■■□□□ 1.01
Cnot3Q8K0V4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnot3Q8K0V4 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.38■■□□□ 1.01
Cnot3Q8K0V4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cnot3Q8K0V4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cnot3Q8K0V4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cnot3Q8K0V4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cnot3Q8K0V4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cnot3Q8K0V4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cnot3Q8K0V4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cnot3Q8K0V4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot3Q8K0V4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot3Q8K0V4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot3Q8K0V4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.34■■□□□ 1.01
Cnot3Q8K0V4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cnot3Q8K0V4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Cnot3Q8K0V4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cnot3Q8K0V4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Cnot3Q8K0V4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cnot3Q8K0V4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnot3Q8K0V4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cnot3Q8K0V4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Cnot3Q8K0V4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.3■■□□□ 1
Cnot3Q8K0V4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.3■■□□□ 1
Cnot3Q8K0V4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnot3Q8K0V4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnot3Q8K0V4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cnot3Q8K0V4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot3Q8K0V4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnot3Q8K0V4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Cnot3Q8K0V4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms