Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.5■■□□□ 1.19
Rdh1Q8CGV4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rdh1Q8CGV4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rdh1Q8CGV4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.48■■□□□ 1.19
Rdh1Q8CGV4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rdh1Q8CGV4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.48■■□□□ 1.19
Rdh1Q8CGV4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rdh1Q8CGV4 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.47■■□□□ 1.19
Rdh1Q8CGV4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Rdh1Q8CGV4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.47■■□□□ 1.19
Rdh1Q8CGV4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Rdh1Q8CGV4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Rdh1Q8CGV4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rdh1Q8CGV4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rdh1Q8CGV4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rdh1Q8CGV4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rdh1Q8CGV4 Gm27502-201ENSMUST00000183495 199 ntBASIC22.43■■□□□ 1.18
Rdh1Q8CGV4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.43■■□□□ 1.18
Rdh1Q8CGV4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Rdh1Q8CGV4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rdh1Q8CGV4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Rdh1Q8CGV4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rdh1Q8CGV4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rdh1Q8CGV4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rdh1Q8CGV4 Terc-201ENSMUST00000082862 423 ntBASIC22.42■■□□□ 1.18
Rdh1Q8CGV4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rdh1Q8CGV4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Gm12366-201ENSMUST00000121722 873 ntBASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Gm5786-201ENSMUST00000085368 882 ntBASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rdh1Q8CGV4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rdh1Q8CGV4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rdh1Q8CGV4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rdh1Q8CGV4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rdh1Q8CGV4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rdh1Q8CGV4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.39■■□□□ 1.17
Rdh1Q8CGV4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rdh1Q8CGV4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.37■■□□□ 1.17
Rdh1Q8CGV4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rdh1Q8CGV4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rdh1Q8CGV4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rdh1Q8CGV4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rdh1Q8CGV4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rdh1Q8CGV4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rdh1Q8CGV4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rdh1Q8CGV4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rdh1Q8CGV4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rdh1Q8CGV4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rdh1Q8CGV4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.35■■□□□ 1.17
Rdh1Q8CGV4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rdh1Q8CGV4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.33■■□□□ 1.17
Rdh1Q8CGV4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.33■■□□□ 1.17
Rdh1Q8CGV4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rdh1Q8CGV4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rdh1Q8CGV4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rdh1Q8CGV4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.3■■□□□ 1.16
Rdh1Q8CGV4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.3■■□□□ 1.16
Rdh1Q8CGV4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rdh1Q8CGV4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rdh1Q8CGV4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.29■■□□□ 1.16
Rdh1Q8CGV4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms