Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShfQ8CG80 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ShfQ8CG80 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShfQ8CG80 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShfQ8CG80 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ShfQ8CG80 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ShfQ8CG80 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ShfQ8CG80 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShfQ8CG80 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.51■□□□□ 0.87
ShfQ8CG80 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShfQ8CG80 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShfQ8CG80 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShfQ8CG80 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ShfQ8CG80 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ShfQ8CG80 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.5■□□□□ 0.87
ShfQ8CG80 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShfQ8CG80 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ShfQ8CG80 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ShfQ8CG80 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShfQ8CG80 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShfQ8CG80 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShfQ8CG80 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ShfQ8CG80 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShfQ8CG80 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ShfQ8CG80 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShfQ8CG80 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.47■□□□□ 0.87
ShfQ8CG80 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ShfQ8CG80 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ShfQ8CG80 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ShfQ8CG80 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.46■□□□□ 0.87
ShfQ8CG80 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.45■□□□□ 0.86
ShfQ8CG80 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ShfQ8CG80 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShfQ8CG80 Nkain2-201ENSMUST00000092602 558 ntBASIC20.45■□□□□ 0.86
ShfQ8CG80 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShfQ8CG80 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShfQ8CG80 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShfQ8CG80 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.43■□□□□ 0.86
ShfQ8CG80 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ShfQ8CG80 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShfQ8CG80 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShfQ8CG80 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShfQ8CG80 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ShfQ8CG80 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ShfQ8CG80 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShfQ8CG80 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShfQ8CG80 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShfQ8CG80 Gm37136-201ENSMUST00000194368 194 ntBASIC20.41■□□□□ 0.86
ShfQ8CG80 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.41■□□□□ 0.86
ShfQ8CG80 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShfQ8CG80 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShfQ8CG80 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ShfQ8CG80 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShfQ8CG80 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ShfQ8CG80 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.4■□□□□ 0.86
ShfQ8CG80 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ShfQ8CG80 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShfQ8CG80 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShfQ8CG80 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShfQ8CG80 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShfQ8CG80 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.38■□□□□ 0.85
ShfQ8CG80 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ShfQ8CG80 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShfQ8CG80 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShfQ8CG80 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShfQ8CG80 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.37■□□□□ 0.85
ShfQ8CG80 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShfQ8CG80 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShfQ8CG80 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShfQ8CG80 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ShfQ8CG80 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShfQ8CG80 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShfQ8CG80 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShfQ8CG80 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShfQ8CG80 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.34■□□□□ 0.85
ShfQ8CG80 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShfQ8CG80 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShfQ8CG80 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.34■□□□□ 0.85
ShfQ8CG80 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShfQ8CG80 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.33■□□□□ 0.85
ShfQ8CG80 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ShfQ8CG80 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ShfQ8CG80 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShfQ8CG80 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.32■□□□□ 0.84
ShfQ8CG80 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShfQ8CG80 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.32■□□□□ 0.84
ShfQ8CG80 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShfQ8CG80 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShfQ8CG80 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ShfQ8CG80 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShfQ8CG80 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShfQ8CG80 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.31■□□□□ 0.84
ShfQ8CG80 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.31■□□□□ 0.84
ShfQ8CG80 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
ShfQ8CG80 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ShfQ8CG80 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShfQ8CG80 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ShfQ8CG80 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ShfQ8CG80 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ShfQ8CG80 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms