Protein–RNA interactions for Protein: Q8CFI0

Nedd4l, E3 ubiquitin-protein ligase NEDD4-like, mousemouse

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4lQ8CFI0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nedd4lQ8CFI0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4lQ8CFI0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nedd4lQ8CFI0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4lQ8CFI0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nedd4lQ8CFI0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Nedd4lQ8CFI0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nedd4lQ8CFI0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nedd4lQ8CFI0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nedd4lQ8CFI0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4lQ8CFI0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4lQ8CFI0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nedd4lQ8CFI0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.63■□□□□ 0.89
Nedd4lQ8CFI0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Nedd4lQ8CFI0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nedd4lQ8CFI0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nedd4lQ8CFI0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4lQ8CFI0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.6■□□□□ 0.89
Nedd4lQ8CFI0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nedd4lQ8CFI0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nedd4lQ8CFI0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.6■□□□□ 0.89
Nedd4lQ8CFI0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nedd4lQ8CFI0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nedd4lQ8CFI0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nedd4lQ8CFI0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Nedd4lQ8CFI0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd4lQ8CFI0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nedd4lQ8CFI0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
Nedd4lQ8CFI0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd4lQ8CFI0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nedd4lQ8CFI0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd4lQ8CFI0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nedd4lQ8CFI0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Nkain2-201ENSMUST00000092602 558 ntBASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nedd4lQ8CFI0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd4lQ8CFI0 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.54■□□□□ 0.88
Nedd4lQ8CFI0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nedd4lQ8CFI0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nedd4lQ8CFI0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.53■□□□□ 0.88
Nedd4lQ8CFI0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nedd4lQ8CFI0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nedd4lQ8CFI0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nedd4lQ8CFI0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nedd4lQ8CFI0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nedd4lQ8CFI0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nedd4lQ8CFI0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nedd4lQ8CFI0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nedd4lQ8CFI0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Nedd4lQ8CFI0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Nedd4lQ8CFI0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nedd4lQ8CFI0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nedd4lQ8CFI0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nedd4lQ8CFI0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nedd4lQ8CFI0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nedd4lQ8CFI0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Nedd4lQ8CFI0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nedd4lQ8CFI0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nedd4lQ8CFI0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nedd4lQ8CFI0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nedd4lQ8CFI0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 Gm7432-201ENSMUST00000210343 879 ntBASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nedd4lQ8CFI0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nedd4lQ8CFI0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nedd4lQ8CFI0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nedd4lQ8CFI0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nedd4lQ8CFI0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nedd4lQ8CFI0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nedd4lQ8CFI0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nedd4lQ8CFI0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nedd4lQ8CFI0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nedd4lQ8CFI0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms