Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf170Q8CBG9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf170Q8CBG9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf170Q8CBG9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.32■□□□□ 0.68
Rnf170Q8CBG9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf170Q8CBG9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf170Q8CBG9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Rnf170Q8CBG9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf170Q8CBG9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf170Q8CBG9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf170Q8CBG9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf170Q8CBG9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf170Q8CBG9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf170Q8CBG9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf170Q8CBG9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
Rnf170Q8CBG9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf170Q8CBG9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf170Q8CBG9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf170Q8CBG9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf170Q8CBG9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf170Q8CBG9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf170Q8CBG9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf170Q8CBG9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf170Q8CBG9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf170Q8CBG9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Rnf170Q8CBG9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf170Q8CBG9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf170Q8CBG9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf170Q8CBG9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf170Q8CBG9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf170Q8CBG9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf170Q8CBG9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf170Q8CBG9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf170Q8CBG9 Gm6821-201ENSMUST00000107540 542 ntBASIC19.21■□□□□ 0.67
Rnf170Q8CBG9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.21■□□□□ 0.67
Rnf170Q8CBG9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rnf170Q8CBG9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf170Q8CBG9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf170Q8CBG9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rnf170Q8CBG9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf170Q8CBG9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf170Q8CBG9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf170Q8CBG9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf170Q8CBG9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf170Q8CBG9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf170Q8CBG9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf170Q8CBG9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.18■□□□□ 0.66
Rnf170Q8CBG9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf170Q8CBG9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.18■□□□□ 0.66
Rnf170Q8CBG9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf170Q8CBG9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf170Q8CBG9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf170Q8CBG9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf170Q8CBG9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf170Q8CBG9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Rnf170Q8CBG9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf170Q8CBG9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf170Q8CBG9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf170Q8CBG9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf170Q8CBG9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf170Q8CBG9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf170Q8CBG9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rnf170Q8CBG9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.15■□□□□ 0.66
Rnf170Q8CBG9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Rnf170Q8CBG9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf170Q8CBG9 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.14■□□□□ 0.65
Rnf170Q8CBG9 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.14■□□□□ 0.65
Rnf170Q8CBG9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf170Q8CBG9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf170Q8CBG9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf170Q8CBG9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf170Q8CBG9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.12■□□□□ 0.65
Rnf170Q8CBG9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms