Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Shisa4Q8CA71 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.16■■□□□ 1.94
Shisa4Q8CA71 Cap2-205ENSMUST00000225824 1634 ntBASIC27.16■■□□□ 1.94
Shisa4Q8CA71 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shisa4Q8CA71 Gm4799-201ENSMUST00000095396 657 ntBASIC27.15■■□□□ 1.94
Shisa4Q8CA71 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shisa4Q8CA71 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Shisa4Q8CA71 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Shisa4Q8CA71 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shisa4Q8CA71 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.13■■□□□ 1.93
Shisa4Q8CA71 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shisa4Q8CA71 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shisa4Q8CA71 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Shisa4Q8CA71 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.12■■□□□ 1.93
Shisa4Q8CA71 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shisa4Q8CA71 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.12■■□□□ 1.93
Shisa4Q8CA71 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Shisa4Q8CA71 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Shisa4Q8CA71 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shisa4Q8CA71 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.11■■□□□ 1.93
Shisa4Q8CA71 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shisa4Q8CA71 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shisa4Q8CA71 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.11■■□□□ 1.93
Shisa4Q8CA71 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shisa4Q8CA71 Mir3960-201ENSMUST00000198213 73 ntBASIC27.1■■□□□ 1.93
Shisa4Q8CA71 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Shisa4Q8CA71 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Shisa4Q8CA71 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Shisa4Q8CA71 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
Shisa4Q8CA71 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shisa4Q8CA71 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.07■■□□□ 1.92
Shisa4Q8CA71 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Shisa4Q8CA71 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shisa4Q8CA71 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.06■■□□□ 1.92
Shisa4Q8CA71 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Shisa4Q8CA71 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shisa4Q8CA71 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Shisa4Q8CA71 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shisa4Q8CA71 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Shisa4Q8CA71 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Shisa4Q8CA71 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Shisa4Q8CA71 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Shisa4Q8CA71 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Shisa4Q8CA71 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.03■■□□□ 1.92
Shisa4Q8CA71 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.03■■□□□ 1.92
Shisa4Q8CA71 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Shisa4Q8CA71 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.03■■□□□ 1.92
Shisa4Q8CA71 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.02■■□□□ 1.92
Shisa4Q8CA71 Gm6311-201ENSMUST00000073790 878 ntBASIC27.02■■□□□ 1.92
Shisa4Q8CA71 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Shisa4Q8CA71 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.01■■□□□ 1.92
Shisa4Q8CA71 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Shisa4Q8CA71 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Shisa4Q8CA71 Gm9812-201ENSMUST00000061934 968 ntBASIC27.01■■□□□ 1.91
Shisa4Q8CA71 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shisa4Q8CA71 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Shisa4Q8CA71 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Shisa4Q8CA71 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Shisa4Q8CA71 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Shisa4Q8CA71 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Shisa4Q8CA71 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Shisa4Q8CA71 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.97■■□□□ 1.91
Shisa4Q8CA71 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Shisa4Q8CA71 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Shisa4Q8CA71 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shisa4Q8CA71 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shisa4Q8CA71 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Shisa4Q8CA71 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Shisa4Q8CA71 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Shisa4Q8CA71 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.95■■□□□ 1.9
Shisa4Q8CA71 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.95■■□□□ 1.9
Shisa4Q8CA71 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Shisa4Q8CA71 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Shisa4Q8CA71 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shisa4Q8CA71 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.94■■□□□ 1.9
Shisa4Q8CA71 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shisa4Q8CA71 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Shisa4Q8CA71 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shisa4Q8CA71 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Shisa4Q8CA71 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shisa4Q8CA71 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Shisa4Q8CA71 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shisa4Q8CA71 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.92■■□□□ 1.9
Shisa4Q8CA71 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shisa4Q8CA71 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shisa4Q8CA71 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Shisa4Q8CA71 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shisa4Q8CA71 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.91■■□□□ 1.9
Shisa4Q8CA71 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms