Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rft1Q8C3B8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.25■□□□□ 0.83
Rft1Q8C3B8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.25■□□□□ 0.83
Rft1Q8C3B8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rft1Q8C3B8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rft1Q8C3B8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rft1Q8C3B8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rft1Q8C3B8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rft1Q8C3B8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rft1Q8C3B8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rft1Q8C3B8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rft1Q8C3B8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rft1Q8C3B8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rft1Q8C3B8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rft1Q8C3B8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rft1Q8C3B8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.22■□□□□ 0.83
Rft1Q8C3B8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rft1Q8C3B8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rft1Q8C3B8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Rft1Q8C3B8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rft1Q8C3B8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rft1Q8C3B8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.19■□□□□ 0.82
Rft1Q8C3B8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rft1Q8C3B8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.19■□□□□ 0.82
Rft1Q8C3B8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rft1Q8C3B8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.19■□□□□ 0.82
Rft1Q8C3B8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rft1Q8C3B8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.19■□□□□ 0.82
Rft1Q8C3B8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rft1Q8C3B8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.18■□□□□ 0.82
Rft1Q8C3B8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rft1Q8C3B8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rft1Q8C3B8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
Rft1Q8C3B8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Rft1Q8C3B8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rft1Q8C3B8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.15■□□□□ 0.82
Rft1Q8C3B8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rft1Q8C3B8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rft1Q8C3B8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rft1Q8C3B8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rft1Q8C3B8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rft1Q8C3B8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rft1Q8C3B8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rft1Q8C3B8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rft1Q8C3B8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rft1Q8C3B8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rft1Q8C3B8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rft1Q8C3B8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rft1Q8C3B8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rft1Q8C3B8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rft1Q8C3B8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rft1Q8C3B8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rft1Q8C3B8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.09■□□□□ 0.81
Rft1Q8C3B8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rft1Q8C3B8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rft1Q8C3B8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rft1Q8C3B8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rft1Q8C3B8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rft1Q8C3B8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rft1Q8C3B8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Rft1Q8C3B8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Rft1Q8C3B8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rft1Q8C3B8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms