Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cps1Q8C196 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cps1Q8C196 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cps1Q8C196 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cps1Q8C196 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
Cps1Q8C196 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Cps1Q8C196 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC32.27■■■□□ 2.76
Cps1Q8C196 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
Cps1Q8C196 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Cps1Q8C196 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Cps1Q8C196 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Cps1Q8C196 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Cps1Q8C196 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Cps1Q8C196 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Cps1Q8C196 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.25■■■□□ 2.75
Cps1Q8C196 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Cps1Q8C196 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC32.25■■■□□ 2.75
Cps1Q8C196 Terc-201ENSMUST00000082862 423 ntBASIC32.25■■■□□ 2.75
Cps1Q8C196 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Cps1Q8C196 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cps1Q8C196 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cps1Q8C196 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Cps1Q8C196 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Cps1Q8C196 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Cps1Q8C196 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Cps1Q8C196 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC32.19■■■□□ 2.74
Cps1Q8C196 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC32.19■■■□□ 2.74
Cps1Q8C196 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.18■■■□□ 2.74
Cps1Q8C196 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cps1Q8C196 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Cps1Q8C196 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Cps1Q8C196 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC32.16■■■□□ 2.74
Cps1Q8C196 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cps1Q8C196 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC32.15■■■□□ 2.74
Cps1Q8C196 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Cps1Q8C196 Gm43445-201ENSMUST00000198564 2091 ntBASIC32.14■■■□□ 2.74
Cps1Q8C196 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Cps1Q8C196 Gm22567-201ENSMUST00000175542 342 ntBASIC32.13■■■□□ 2.73
Cps1Q8C196 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cps1Q8C196 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Cps1Q8C196 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
Cps1Q8C196 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.12■■■□□ 2.73
Cps1Q8C196 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Cps1Q8C196 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Cps1Q8C196 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Cps1Q8C196 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Cps1Q8C196 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cps1Q8C196 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Cps1Q8C196 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC32.08■■■□□ 2.73
Cps1Q8C196 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Cps1Q8C196 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC32.08■■■□□ 2.73
Cps1Q8C196 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Cps1Q8C196 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
Cps1Q8C196 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.06■■■□□ 2.72
Cps1Q8C196 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cps1Q8C196 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.05■■■□□ 2.72
Cps1Q8C196 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC32.05■■■□□ 2.72
Cps1Q8C196 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
Cps1Q8C196 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cps1Q8C196 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Cps1Q8C196 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Cps1Q8C196 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
Cps1Q8C196 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cps1Q8C196 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cps1Q8C196 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Cps1Q8C196 Gm37847-201ENSMUST00000192163 1497 ntBASIC32.01■■■□□ 2.71
Cps1Q8C196 Gm31748-201ENSMUST00000194938 1497 ntBASIC32.01■■■□□ 2.71
Cps1Q8C196 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32.01■■■□□ 2.71
Cps1Q8C196 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32■■■□□ 2.71
Cps1Q8C196 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cps1Q8C196 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Cps1Q8C196 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Cps1Q8C196 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cps1Q8C196 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cps1Q8C196 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Cps1Q8C196 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cps1Q8C196 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Cps1Q8C196 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cps1Q8C196 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cps1Q8C196 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
Cps1Q8C196 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cps1Q8C196 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.96■■■□□ 2.71
Cps1Q8C196 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cps1Q8C196 Gm5522-201ENSMUST00000189483 1242 ntBASIC31.95■■■□□ 2.71
Cps1Q8C196 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Cps1Q8C196 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cps1Q8C196 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cps1Q8C196 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Cps1Q8C196 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Cps1Q8C196 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.94■■■□□ 2.7
Cps1Q8C196 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Cps1Q8C196 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Cps1Q8C196 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
Cps1Q8C196 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cps1Q8C196 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cps1Q8C196 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Cps1Q8C196 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cps1Q8C196 Gm44428-201ENSMUST00000204474 874 ntBASIC31.9■■■□□ 2.7
Cps1Q8C196 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cps1Q8C196 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms