Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps9d1Q8C190 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Vps9d1Q8C190 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps9d1Q8C190 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
Vps9d1Q8C190 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.33■■□□□ 1.01
Vps9d1Q8C190 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Vps9d1Q8C190 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Vps9d1Q8C190 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps9d1Q8C190 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps9d1Q8C190 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Vps9d1Q8C190 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Vps9d1Q8C190 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Vps9d1Q8C190 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps9d1Q8C190 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps9d1Q8C190 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vps9d1Q8C190 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps9d1Q8C190 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps9d1Q8C190 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vps9d1Q8C190 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps9d1Q8C190 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps9d1Q8C190 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps9d1Q8C190 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps9d1Q8C190 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vps9d1Q8C190 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps9d1Q8C190 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps9d1Q8C190 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps9d1Q8C190 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps9d1Q8C190 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps9d1Q8C190 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Vps9d1Q8C190 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps9d1Q8C190 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vps9d1Q8C190 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps9d1Q8C190 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps9d1Q8C190 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vps9d1Q8C190 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps9d1Q8C190 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps9d1Q8C190 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vps9d1Q8C190 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.25■□□□□ 0.99
Vps9d1Q8C190 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps9d1Q8C190 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vps9d1Q8C190 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps9d1Q8C190 Gm8503-201ENSMUST00000118131 455 ntBASIC21.24■□□□□ 0.99
Vps9d1Q8C190 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Vps9d1Q8C190 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.24■□□□□ 0.99
Vps9d1Q8C190 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vps9d1Q8C190 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vps9d1Q8C190 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Gm6821-201ENSMUST00000107540 542 ntBASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Vps9d1Q8C190 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps9d1Q8C190 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps9d1Q8C190 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vps9d1Q8C190 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps9d1Q8C190 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vps9d1Q8C190 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vps9d1Q8C190 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps9d1Q8C190 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps9d1Q8C190 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vps9d1Q8C190 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.19■□□□□ 0.98
Vps9d1Q8C190 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps9d1Q8C190 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vps9d1Q8C190 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vps9d1Q8C190 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps9d1Q8C190 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vps9d1Q8C190 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps9d1Q8C190 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vps9d1Q8C190 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.17■□□□□ 0.98
Vps9d1Q8C190 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.16■□□□□ 0.98
Vps9d1Q8C190 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps9d1Q8C190 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps9d1Q8C190 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps9d1Q8C190 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps9d1Q8C190 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps9d1Q8C190 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps9d1Q8C190 Nkain2-201ENSMUST00000092602 558 ntBASIC21.14■□□□□ 0.97
Vps9d1Q8C190 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps9d1Q8C190 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps9d1Q8C190 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms