Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne1Q8C166 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne1Q8C166 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne1Q8C166 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cpne1Q8C166 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne1Q8C166 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne1Q8C166 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne1Q8C166 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cpne1Q8C166 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpne1Q8C166 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpne1Q8C166 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cpne1Q8C166 Gm4799-201ENSMUST00000095396 657 ntBASIC21.36■■□□□ 1.01
Cpne1Q8C166 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.35■■□□□ 1.01
Cpne1Q8C166 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpne1Q8C166 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cpne1Q8C166 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cpne1Q8C166 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cpne1Q8C166 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cpne1Q8C166 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cpne1Q8C166 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Cpne1Q8C166 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Cpne1Q8C166 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cpne1Q8C166 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.32■■□□□ 1
Cpne1Q8C166 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cpne1Q8C166 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cpne1Q8C166 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cpne1Q8C166 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpne1Q8C166 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cpne1Q8C166 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.31■■□□□ 1
Cpne1Q8C166 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.31■■□□□ 1
Cpne1Q8C166 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cpne1Q8C166 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cpne1Q8C166 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cpne1Q8C166 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne1Q8C166 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne1Q8C166 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.29■■□□□ 1
Cpne1Q8C166 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne1Q8C166 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cpne1Q8C166 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne1Q8C166 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cpne1Q8C166 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne1Q8C166 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.28■■□□□ 1
Cpne1Q8C166 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cpne1Q8C166 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Cpne1Q8C166 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cpne1Q8C166 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cpne1Q8C166 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cpne1Q8C166 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cpne1Q8C166 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cpne1Q8C166 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cpne1Q8C166 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.25■□□□□ 0.99
Cpne1Q8C166 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne1Q8C166 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cpne1Q8C166 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne1Q8C166 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cpne1Q8C166 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.24■□□□□ 0.99
Cpne1Q8C166 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.24■□□□□ 0.99
Cpne1Q8C166 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.23■□□□□ 0.99
Cpne1Q8C166 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne1Q8C166 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne1Q8C166 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne1Q8C166 Mir3960-201ENSMUST00000198213 73 ntBASIC21.23■□□□□ 0.99
Cpne1Q8C166 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.23■□□□□ 0.99
Cpne1Q8C166 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cpne1Q8C166 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cpne1Q8C166 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne1Q8C166 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cpne1Q8C166 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.21■□□□□ 0.99
Cpne1Q8C166 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cpne1Q8C166 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cpne1Q8C166 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpne1Q8C166 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.2■□□□□ 0.98
Cpne1Q8C166 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpne1Q8C166 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cpne1Q8C166 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
Cpne1Q8C166 Gm6311-201ENSMUST00000073790 878 ntBASIC21.19■□□□□ 0.98
Cpne1Q8C166 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Gm45364-201ENSMUST00000210883 159 ntBASIC21.18■□□□□ 0.98
Cpne1Q8C166 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cpne1Q8C166 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Cpne1Q8C166 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms