Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.93■■□□□ 1.42
Sh3rf3Q8C120 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Sh3rf3Q8C120 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf3Q8C120 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf3Q8C120 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Sh3rf3Q8C120 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sh3rf3Q8C120 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sh3rf3Q8C120 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sh3rf3Q8C120 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3rf3Q8C120 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3rf3Q8C120 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3rf3Q8C120 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sh3rf3Q8C120 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Sh3rf3Q8C120 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Sh3rf3Q8C120 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.89■■□□□ 1.41
Sh3rf3Q8C120 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3rf3Q8C120 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Sh3rf3Q8C120 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf3Q8C120 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf3Q8C120 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf3Q8C120 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sh3rf3Q8C120 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf3Q8C120 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf3Q8C120 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf3Q8C120 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Sh3rf3Q8C120 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf3Q8C120 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf3Q8C120 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf3Q8C120 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf3Q8C120 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sh3rf3Q8C120 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.84■■□□□ 1.41
Sh3rf3Q8C120 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sh3rf3Q8C120 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Sh3rf3Q8C120 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Sh3rf3Q8C120 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 Gm7432-201ENSMUST00000210343 879 ntBASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sh3rf3Q8C120 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sh3rf3Q8C120 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3rf3Q8C120 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Sh3rf3Q8C120 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3rf3Q8C120 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3rf3Q8C120 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Sh3rf3Q8C120 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Sh3rf3Q8C120 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3rf3Q8C120 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.78■■□□□ 1.4
Sh3rf3Q8C120 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Sh3rf3Q8C120 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Sh3rf3Q8C120 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sh3rf3Q8C120 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Sh3rf3Q8C120 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Sh3rf3Q8C120 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3rf3Q8C120 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Sh3rf3Q8C120 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Sh3rf3Q8C120 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3rf3Q8C120 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3rf3Q8C120 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sh3rf3Q8C120 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Sh3rf3Q8C120 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sh3rf3Q8C120 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.75■■□□□ 1.39
Sh3rf3Q8C120 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.74■■□□□ 1.39
Sh3rf3Q8C120 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3rf3Q8C120 Gm11599-201ENSMUST00000118720 878 ntBASIC23.74■■□□□ 1.39
Sh3rf3Q8C120 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3rf3Q8C120 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sh3rf3Q8C120 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Sh3rf3Q8C120 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3rf3Q8C120 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.73■■□□□ 1.39
Sh3rf3Q8C120 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sh3rf3Q8C120 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.73■■□□□ 1.39
Sh3rf3Q8C120 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Sh3rf3Q8C120 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sh3rf3Q8C120 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Sh3rf3Q8C120 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh3rf3Q8C120 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sh3rf3Q8C120 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Sh3rf3Q8C120 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Sh3rf3Q8C120 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3rf3Q8C120 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3rf3Q8C120 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sh3rf3Q8C120 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.68■■□□□ 1.38
Sh3rf3Q8C120 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms