Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC37.76■■■■□ 3.63
Pbrm1Q8BSQ9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC37.75■■■■□ 3.63
Pbrm1Q8BSQ9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC37.75■■■■□ 3.63
Pbrm1Q8BSQ9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
Pbrm1Q8BSQ9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC37.74■■■■□ 3.63
Pbrm1Q8BSQ9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC37.74■■■■□ 3.63
Pbrm1Q8BSQ9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Pbrm1Q8BSQ9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC37.74■■■■□ 3.63
Pbrm1Q8BSQ9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Pbrm1Q8BSQ9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Pbrm1Q8BSQ9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC37.71■■■■□ 3.63
Pbrm1Q8BSQ9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC37.71■■■■□ 3.63
Pbrm1Q8BSQ9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
Pbrm1Q8BSQ9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.69■■■■□ 3.62
Pbrm1Q8BSQ9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC37.69■■■■□ 3.62
Pbrm1Q8BSQ9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC37.67■■■■□ 3.62
Pbrm1Q8BSQ9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC37.66■■■■□ 3.62
Pbrm1Q8BSQ9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC37.65■■■■□ 3.62
Pbrm1Q8BSQ9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pbrm1Q8BSQ9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC37.65■■■■□ 3.62
Pbrm1Q8BSQ9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Pbrm1Q8BSQ9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Pbrm1Q8BSQ9 AC093043.1-201ENSMUST00000226700 898 ntBASIC37.64■■■■□ 3.62
Pbrm1Q8BSQ9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC37.64■■■■□ 3.62
Pbrm1Q8BSQ9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.62
Pbrm1Q8BSQ9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC37.63■■■■□ 3.61
Pbrm1Q8BSQ9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Pbrm1Q8BSQ9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC37.63■■■■□ 3.61
Pbrm1Q8BSQ9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC37.63■■■■□ 3.61
Pbrm1Q8BSQ9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC37.62■■■■□ 3.61
Pbrm1Q8BSQ9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC37.62■■■■□ 3.61
Pbrm1Q8BSQ9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Pbrm1Q8BSQ9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC37.61■■■■□ 3.61
Pbrm1Q8BSQ9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
Pbrm1Q8BSQ9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC37.61■■■■□ 3.61
Pbrm1Q8BSQ9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
Pbrm1Q8BSQ9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pbrm1Q8BSQ9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
Pbrm1Q8BSQ9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC37.6■■■■□ 3.61
Pbrm1Q8BSQ9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Pbrm1Q8BSQ9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Pbrm1Q8BSQ9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC37.59■■■■□ 3.61
Pbrm1Q8BSQ9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC37.59■■■■□ 3.61
Pbrm1Q8BSQ9 Gm14121-201ENSMUST00000121441 1380 ntBASIC37.59■■■■□ 3.61
Pbrm1Q8BSQ9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC37.58■■■■□ 3.61
Pbrm1Q8BSQ9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Pbrm1Q8BSQ9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Pbrm1Q8BSQ9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
Pbrm1Q8BSQ9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Pbrm1Q8BSQ9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC37.57■■■■□ 3.61
Pbrm1Q8BSQ9 Gm15820-201ENSMUST00000201566 728 ntBASIC37.57■■■■□ 3.6
Pbrm1Q8BSQ9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC37.57■■■■□ 3.6
Pbrm1Q8BSQ9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
Pbrm1Q8BSQ9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Pbrm1Q8BSQ9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pbrm1Q8BSQ9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pbrm1Q8BSQ9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC37.55■■■■□ 3.6
Pbrm1Q8BSQ9 Rps24-207ENSMUST00000224568 714 ntBASIC37.54■■■■□ 3.6
Pbrm1Q8BSQ9 Gm45444-201ENSMUST00000211394 898 ntBASIC37.54■■■■□ 3.6
Pbrm1Q8BSQ9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pbrm1Q8BSQ9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
Pbrm1Q8BSQ9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Pbrm1Q8BSQ9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC37.51■■■■□ 3.6
Pbrm1Q8BSQ9 Gm13238-201ENSMUST00000117655 780 ntBASIC37.51■■■■□ 3.6
Pbrm1Q8BSQ9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC37.51■■■■□ 3.6
Pbrm1Q8BSQ9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC37.5■■■■□ 3.59
Pbrm1Q8BSQ9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC37.5■■■■□ 3.59
Pbrm1Q8BSQ9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC37.5■■■■□ 3.59
Pbrm1Q8BSQ9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Pbrm1Q8BSQ9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
Pbrm1Q8BSQ9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC37.47■■■■□ 3.59
Pbrm1Q8BSQ9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Pbrm1Q8BSQ9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC37.46■■■■□ 3.59
Pbrm1Q8BSQ9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Pbrm1Q8BSQ9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC37.45■■■■□ 3.58
Pbrm1Q8BSQ9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Gm44428-201ENSMUST00000204474 874 ntBASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Pbrm1Q8BSQ9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pbrm1Q8BSQ9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC37.42■■■■□ 3.58
Pbrm1Q8BSQ9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Pbrm1Q8BSQ9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
Pbrm1Q8BSQ9 Gm14117-201ENSMUST00000122417 843 ntBASIC37.41■■■■□ 3.58
Pbrm1Q8BSQ9 Gm43592-201ENSMUST00000196922 1165 ntBASIC37.4■■■■□ 3.58
Pbrm1Q8BSQ9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC37.4■■■■□ 3.58
Pbrm1Q8BSQ9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Pbrm1Q8BSQ9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC37.39■■■■□ 3.58
Pbrm1Q8BSQ9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC37.39■■■■□ 3.58
Pbrm1Q8BSQ9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Pbrm1Q8BSQ9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Pbrm1Q8BSQ9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Pbrm1Q8BSQ9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC37.35■■■■□ 3.57
Pbrm1Q8BSQ9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC37.35■■■■□ 3.57
Pbrm1Q8BSQ9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC37.34■■■■□ 3.57
Pbrm1Q8BSQ9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC37.34■■■■□ 3.57
Pbrm1Q8BSQ9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Pbrm1Q8BSQ9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms