Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cdkl3Q8BLF2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Cdkl3Q8BLF2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdkl3Q8BLF2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdkl3Q8BLF2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cdkl3Q8BLF2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkl3Q8BLF2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkl3Q8BLF2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdkl3Q8BLF2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkl3Q8BLF2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdkl3Q8BLF2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkl3Q8BLF2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkl3Q8BLF2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdkl3Q8BLF2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdkl3Q8BLF2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdkl3Q8BLF2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.71■□□□□ 0.75
Cdkl3Q8BLF2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdkl3Q8BLF2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl3Q8BLF2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl3Q8BLF2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl3Q8BLF2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cdkl3Q8BLF2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cdkl3Q8BLF2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cdkl3Q8BLF2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl3Q8BLF2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl3Q8BLF2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl3Q8BLF2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdkl3Q8BLF2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdkl3Q8BLF2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdkl3Q8BLF2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl3Q8BLF2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl3Q8BLF2 Peli2-204ENSMUST00000226513 1320 ntBASIC19.63■□□□□ 0.73
Cdkl3Q8BLF2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdkl3Q8BLF2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Cdkl3Q8BLF2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl3Q8BLF2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl3Q8BLF2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdkl3Q8BLF2 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.62■□□□□ 0.73
Cdkl3Q8BLF2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdkl3Q8BLF2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cdkl3Q8BLF2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdkl3Q8BLF2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkl3Q8BLF2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdkl3Q8BLF2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms