Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc5a7Q8BGY9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Slc5a7Q8BGY9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc5a7Q8BGY9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.14■□□□□ 0.82
Slc5a7Q8BGY9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc5a7Q8BGY9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc5a7Q8BGY9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc5a7Q8BGY9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc5a7Q8BGY9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc5a7Q8BGY9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc5a7Q8BGY9 Particl-201ENSMUST00000205370 1560 ntBASIC20.11■□□□□ 0.81
Slc5a7Q8BGY9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc5a7Q8BGY9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc5a7Q8BGY9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Slc5a7Q8BGY9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc5a7Q8BGY9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Slc5a7Q8BGY9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.1■□□□□ 0.81
Slc5a7Q8BGY9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc5a7Q8BGY9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc5a7Q8BGY9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc5a7Q8BGY9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc5a7Q8BGY9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc5a7Q8BGY9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc5a7Q8BGY9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc5a7Q8BGY9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc5a7Q8BGY9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc5a7Q8BGY9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc5a7Q8BGY9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slc5a7Q8BGY9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slc5a7Q8BGY9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc5a7Q8BGY9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc5a7Q8BGY9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.05■□□□□ 0.8
Slc5a7Q8BGY9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc5a7Q8BGY9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc5a7Q8BGY9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Slc5a7Q8BGY9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Gm8109-201ENSMUST00000194076 746 ntBASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc5a7Q8BGY9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc5a7Q8BGY9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc5a7Q8BGY9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc5a7Q8BGY9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc5a7Q8BGY9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc5a7Q8BGY9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
Slc5a7Q8BGY9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc5a7Q8BGY9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc5a7Q8BGY9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20■□□□□ 0.79
Slc5a7Q8BGY9 Gm16148-201ENSMUST00000119653 893 ntBASIC20■□□□□ 0.79
Slc5a7Q8BGY9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Slc5a7Q8BGY9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc5a7Q8BGY9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Slc5a7Q8BGY9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc5a7Q8BGY9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc5a7Q8BGY9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Slc5a7Q8BGY9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc5a7Q8BGY9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms