Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3tc2Q80VA5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3tc2Q80VA5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3tc2Q80VA5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3tc2Q80VA5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sh3tc2Q80VA5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Sh3tc2Q80VA5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
Sh3tc2Q80VA5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.07■■□□□ 1.6
Sh3tc2Q80VA5 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.07■■□□□ 1.6
Sh3tc2Q80VA5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3tc2Q80VA5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3tc2Q80VA5 Gm15039-201ENSMUST00000118914 875 ntBASIC25.06■■□□□ 1.6
Sh3tc2Q80VA5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3tc2Q80VA5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Sh3tc2Q80VA5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sh3tc2Q80VA5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.04■■□□□ 1.6
Sh3tc2Q80VA5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3tc2Q80VA5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sh3tc2Q80VA5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Sh3tc2Q80VA5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 Gm22567-201ENSMUST00000175542 342 ntBASIC25.02■■□□□ 1.6
Sh3tc2Q80VA5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3tc2Q80VA5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.01■■□□□ 1.59
Sh3tc2Q80VA5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3tc2Q80VA5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sh3tc2Q80VA5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Gm5812-201ENSMUST00000061073 957 ntBASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Sh3tc2Q80VA5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sh3tc2Q80VA5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Sh3tc2Q80VA5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Sh3tc2Q80VA5 Gm10420-201ENSMUST00000121713 882 ntBASIC24.98■■□□□ 1.59
Sh3tc2Q80VA5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sh3tc2Q80VA5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sh3tc2Q80VA5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3tc2Q80VA5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.96■■□□□ 1.59
Sh3tc2Q80VA5 Gm9812-201ENSMUST00000061934 968 ntBASIC24.96■■□□□ 1.59
Sh3tc2Q80VA5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Sh3tc2Q80VA5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sh3tc2Q80VA5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3tc2Q80VA5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3tc2Q80VA5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Sh3tc2Q80VA5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3tc2Q80VA5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3tc2Q80VA5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Sh3tc2Q80VA5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Sh3tc2Q80VA5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.93■■□□□ 1.58
Sh3tc2Q80VA5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3tc2Q80VA5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Sh3tc2Q80VA5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.91■■□□□ 1.58
Sh3tc2Q80VA5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Sh3tc2Q80VA5 Gm5921-201ENSMUST00000075898 882 ntBASIC24.91■■□□□ 1.58
Sh3tc2Q80VA5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.9■■□□□ 1.58
Sh3tc2Q80VA5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.9■■□□□ 1.58
Sh3tc2Q80VA5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Sh3tc2Q80VA5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.89■■□□□ 1.58
Sh3tc2Q80VA5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Sh3tc2Q80VA5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Sh3tc2Q80VA5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.88■■□□□ 1.57
Sh3tc2Q80VA5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3tc2Q80VA5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3tc2Q80VA5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Sh3tc2Q80VA5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Sh3tc2Q80VA5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3tc2Q80VA5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sh3tc2Q80VA5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sh3tc2Q80VA5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Sh3tc2Q80VA5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sh3tc2Q80VA5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3tc2Q80VA5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.85■■□□□ 1.57
Sh3tc2Q80VA5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3tc2Q80VA5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sh3tc2Q80VA5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Sh3tc2Q80VA5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sh3tc2Q80VA5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.83■■□□□ 1.57
Sh3tc2Q80VA5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 589.5 ms