Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.27■■□□□ 1.64
Ush1gQ80T11 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ush1gQ80T11 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Ush1gQ80T11 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ush1gQ80T11 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ush1gQ80T11 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ush1gQ80T11 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ush1gQ80T11 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ush1gQ80T11 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.25■■□□□ 1.63
Ush1gQ80T11 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.25■■□□□ 1.63
Ush1gQ80T11 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ush1gQ80T11 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.25■■□□□ 1.63
Ush1gQ80T11 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Ush1gQ80T11 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Ush1gQ80T11 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ush1gQ80T11 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ush1gQ80T11 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ush1gQ80T11 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.24■■□□□ 1.63
Ush1gQ80T11 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ush1gQ80T11 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.23■■□□□ 1.63
Ush1gQ80T11 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ush1gQ80T11 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Ush1gQ80T11 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ush1gQ80T11 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ush1gQ80T11 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ush1gQ80T11 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.21■■□□□ 1.63
Ush1gQ80T11 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.21■■□□□ 1.63
Ush1gQ80T11 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Ush1gQ80T11 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ush1gQ80T11 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ush1gQ80T11 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ush1gQ80T11 Gm14523-201ENSMUST00000117260 558 ntBASIC25.18■■□□□ 1.62
Ush1gQ80T11 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ush1gQ80T11 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ush1gQ80T11 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ush1gQ80T11 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ush1gQ80T11 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ush1gQ80T11 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Ush1gQ80T11 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.16■■□□□ 1.62
Ush1gQ80T11 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ush1gQ80T11 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ush1gQ80T11 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ush1gQ80T11 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.13■■□□□ 1.61
Ush1gQ80T11 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ush1gQ80T11 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ush1gQ80T11 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Ush1gQ80T11 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ush1gQ80T11 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ush1gQ80T11 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ush1gQ80T11 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ush1gQ80T11 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ush1gQ80T11 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ush1gQ80T11 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ush1gQ80T11 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ush1gQ80T11 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ush1gQ80T11 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ush1gQ80T11 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.1■■□□□ 1.61
Ush1gQ80T11 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Ush1gQ80T11 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ush1gQ80T11 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ush1gQ80T11 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.08■■□□□ 1.61
Ush1gQ80T11 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Ush1gQ80T11 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ush1gQ80T11 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Ush1gQ80T11 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ush1gQ80T11 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ush1gQ80T11 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Ush1gQ80T11 Gm9812-201ENSMUST00000061934 968 ntBASIC25.07■■□□□ 1.6
Ush1gQ80T11 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ush1gQ80T11 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ush1gQ80T11 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ush1gQ80T11 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ush1gQ80T11 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.04■■□□□ 1.6
Ush1gQ80T11 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Ush1gQ80T11 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ush1gQ80T11 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Ush1gQ80T11 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ush1gQ80T11 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.02■■□□□ 1.6
Ush1gQ80T11 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ush1gQ80T11 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.02■■□□□ 1.6
Ush1gQ80T11 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ush1gQ80T11 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.01■■□□□ 1.59
Ush1gQ80T11 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ush1gQ80T11 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.01■■□□□ 1.59
Ush1gQ80T11 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ush1gQ80T11 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ush1gQ80T11 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ush1gQ80T11 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Ush1gQ80T11 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
Ush1gQ80T11 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25■■□□□ 1.59
Ush1gQ80T11 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ush1gQ80T11 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ush1gQ80T11 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ush1gQ80T11 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ush1gQ80T11 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 157 ms