Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.99■■□□□ 1.59
ChpfQ6IQX7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.98■■□□□ 1.59
ChpfQ6IQX7 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ChpfQ6IQX7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.97■■□□□ 1.59
ChpfQ6IQX7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.96■■□□□ 1.59
ChpfQ6IQX7 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.96■■□□□ 1.59
ChpfQ6IQX7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
ChpfQ6IQX7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.95■■□□□ 1.58
ChpfQ6IQX7 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.95■■□□□ 1.58
ChpfQ6IQX7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ChpfQ6IQX7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
ChpfQ6IQX7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ChpfQ6IQX7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
ChpfQ6IQX7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
ChpfQ6IQX7 Terc-201ENSMUST00000082862 423 ntBASIC24.92■■□□□ 1.58
ChpfQ6IQX7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ChpfQ6IQX7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.91■■□□□ 1.58
ChpfQ6IQX7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
ChpfQ6IQX7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
ChpfQ6IQX7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ChpfQ6IQX7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.89■■□□□ 1.58
ChpfQ6IQX7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.89■■□□□ 1.58
ChpfQ6IQX7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ChpfQ6IQX7 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.88■■□□□ 1.57
ChpfQ6IQX7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ChpfQ6IQX7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ChpfQ6IQX7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ChpfQ6IQX7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ChpfQ6IQX7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ChpfQ6IQX7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ChpfQ6IQX7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
ChpfQ6IQX7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ChpfQ6IQX7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ChpfQ6IQX7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ChpfQ6IQX7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ChpfQ6IQX7 Amer2-203ENSMUST00000225247 2662 ntBASIC24.83■■□□□ 1.57
ChpfQ6IQX7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ChpfQ6IQX7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ChpfQ6IQX7 Gm10420-201ENSMUST00000121713 882 ntBASIC24.82■■□□□ 1.56
ChpfQ6IQX7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.81■■□□□ 1.56
ChpfQ6IQX7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.81■■□□□ 1.56
ChpfQ6IQX7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ChpfQ6IQX7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ChpfQ6IQX7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
ChpfQ6IQX7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ChpfQ6IQX7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
ChpfQ6IQX7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ChpfQ6IQX7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ChpfQ6IQX7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ChpfQ6IQX7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.78■■□□□ 1.56
ChpfQ6IQX7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ChpfQ6IQX7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ChpfQ6IQX7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ChpfQ6IQX7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ChpfQ6IQX7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
ChpfQ6IQX7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ChpfQ6IQX7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ChpfQ6IQX7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ChpfQ6IQX7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ChpfQ6IQX7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ChpfQ6IQX7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.74■■□□□ 1.55
ChpfQ6IQX7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ChpfQ6IQX7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
ChpfQ6IQX7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ChpfQ6IQX7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.72■■□□□ 1.55
ChpfQ6IQX7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ChpfQ6IQX7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
ChpfQ6IQX7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
ChpfQ6IQX7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ChpfQ6IQX7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
ChpfQ6IQX7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
ChpfQ6IQX7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ChpfQ6IQX7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms