Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tff3Q62395 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.98■□□□□ 0.79
Tff3Q62395 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.98■□□□□ 0.79
Tff3Q62395 Gm12366-201ENSMUST00000121722 873 ntBASIC19.98■□□□□ 0.79
Tff3Q62395 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.98■□□□□ 0.79
Tff3Q62395 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tff3Q62395 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.98■□□□□ 0.79
Tff3Q62395 Gm5786-201ENSMUST00000085368 882 ntBASIC19.98■□□□□ 0.79
Tff3Q62395 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tff3Q62395 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tff3Q62395 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tff3Q62395 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tff3Q62395 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tff3Q62395 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tff3Q62395 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tff3Q62395 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tff3Q62395 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tff3Q62395 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tff3Q62395 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tff3Q62395 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tff3Q62395 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tff3Q62395 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
Tff3Q62395 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tff3Q62395 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tff3Q62395 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff3Q62395 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff3Q62395 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff3Q62395 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff3Q62395 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tff3Q62395 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tff3Q62395 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tff3Q62395 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Tff3Q62395 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tff3Q62395 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Tff3Q62395 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tff3Q62395 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tff3Q62395 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.89■□□□□ 0.77
Tff3Q62395 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tff3Q62395 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.88■□□□□ 0.77
Tff3Q62395 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tff3Q62395 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tff3Q62395 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.87■□□□□ 0.77
Tff3Q62395 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tff3Q62395 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Tff3Q62395 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tff3Q62395 Terc-201ENSMUST00000082862 423 ntBASIC19.87■□□□□ 0.77
Tff3Q62395 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tff3Q62395 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tff3Q62395 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tff3Q62395 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.86■□□□□ 0.77
Tff3Q62395 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tff3Q62395 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tff3Q62395 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tff3Q62395 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tff3Q62395 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tff3Q62395 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tff3Q62395 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tff3Q62395 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Tff3Q62395 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tff3Q62395 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tff3Q62395 Gm7332-201ENSMUST00000118351 454 ntBASIC19.84■□□□□ 0.77
Tff3Q62395 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.84■□□□□ 0.77
Tff3Q62395 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tff3Q62395 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tff3Q62395 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.83■□□□□ 0.76
Tff3Q62395 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tff3Q62395 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Tff3Q62395 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tff3Q62395 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tff3Q62395 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.82■□□□□ 0.76
Tff3Q62395 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.82■□□□□ 0.76
Tff3Q62395 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tff3Q62395 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tff3Q62395 Gm14523-201ENSMUST00000117260 558 ntBASIC19.81■□□□□ 0.76
Tff3Q62395 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.81■□□□□ 0.76
Tff3Q62395 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tff3Q62395 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tff3Q62395 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.81■□□□□ 0.76
Tff3Q62395 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Tff3Q62395 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Tff3Q62395 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tff3Q62395 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Tff3Q62395 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Tff3Q62395 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms