Protein–RNA interactions for Protein: Q62219

Tgfb1i1, Transforming growth factor beta-1-induced transcript 1 protein, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1i1Q62219 Scarna2-201ENSMUST00000157560 414 ntBASIC28.49■■■□□ 2.15
Tgfb1i1Q62219 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Tgfb1i1Q62219 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.49■■■□□ 2.15
Tgfb1i1Q62219 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tgfb1i1Q62219 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tgfb1i1Q62219 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.47■■■□□ 2.15
Tgfb1i1Q62219 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tgfb1i1Q62219 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
Tgfb1i1Q62219 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.45■■■□□ 2.14
Tgfb1i1Q62219 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Tgfb1i1Q62219 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tgfb1i1Q62219 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Tgfb1i1Q62219 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tgfb1i1Q62219 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.43■■■□□ 2.14
Tgfb1i1Q62219 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.43■■■□□ 2.14
Tgfb1i1Q62219 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.43■■■□□ 2.14
Tgfb1i1Q62219 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.42■■■□□ 2.14
Tgfb1i1Q62219 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.42■■■□□ 2.14
Tgfb1i1Q62219 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tgfb1i1Q62219 Gm16437-201ENSMUST00000025669 507 ntBASIC28.41■■■□□ 2.14
Tgfb1i1Q62219 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tgfb1i1Q62219 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tgfb1i1Q62219 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tgfb1i1Q62219 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Tgfb1i1Q62219 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tgfb1i1Q62219 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Tgfb1i1Q62219 Mir6538-201ENSMUST00000183713 110 ntBASIC28.39■■■□□ 2.14
Tgfb1i1Q62219 Gm9806-201ENSMUST00000051080 552 ntBASIC28.39■■■□□ 2.14
Tgfb1i1Q62219 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Tgfb1i1Q62219 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Tgfb1i1Q62219 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Tgfb1i1Q62219 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Tgfb1i1Q62219 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tgfb1i1Q62219 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Tgfb1i1Q62219 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Tgfb1i1Q62219 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tgfb1i1Q62219 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.36■■■□□ 2.13
Tgfb1i1Q62219 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Tgfb1i1Q62219 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC28.35■■■□□ 2.13
Tgfb1i1Q62219 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tgfb1i1Q62219 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Tgfb1i1Q62219 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tgfb1i1Q62219 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tgfb1i1Q62219 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tgfb1i1Q62219 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Tgfb1i1Q62219 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tgfb1i1Q62219 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Tgfb1i1Q62219 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Tgfb1i1Q62219 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tgfb1i1Q62219 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tgfb1i1Q62219 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Tgfb1i1Q62219 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tgfb1i1Q62219 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tgfb1i1Q62219 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tgfb1i1Q62219 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Tgfb1i1Q62219 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Tgfb1i1Q62219 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.3■■■□□ 2.12
Tgfb1i1Q62219 Gm11687-201ENSMUST00000118911 886 ntBASIC28.29■■■□□ 2.12
Tgfb1i1Q62219 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tgfb1i1Q62219 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tgfb1i1Q62219 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Tgfb1i1Q62219 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.28■■■□□ 2.12
Tgfb1i1Q62219 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Tgfb1i1Q62219 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tgfb1i1Q62219 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Tgfb1i1Q62219 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.26■■■□□ 2.11
Tgfb1i1Q62219 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Tgfb1i1Q62219 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Tgfb1i1Q62219 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tgfb1i1Q62219 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Tgfb1i1Q62219 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Tgfb1i1Q62219 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.23■■■□□ 2.11
Tgfb1i1Q62219 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tgfb1i1Q62219 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
Tgfb1i1Q62219 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.22■■■□□ 2.11
Tgfb1i1Q62219 Terc-201ENSMUST00000082862 423 ntBASIC28.22■■■□□ 2.11
Tgfb1i1Q62219 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Tgfb1i1Q62219 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tgfb1i1Q62219 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tgfb1i1Q62219 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tgfb1i1Q62219 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tgfb1i1Q62219 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Tgfb1i1Q62219 Cap2-205ENSMUST00000225824 1634 ntBASIC28.2■■■□□ 2.1
Tgfb1i1Q62219 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tgfb1i1Q62219 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms