Protein–RNA interactions for Protein: Q61850

Foxc2, Forkhead box protein C2, mousemouse

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc2Q61850 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Foxc2Q61850 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Foxc2Q61850 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxc2Q61850 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxc2Q61850 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.95■□□□□ 0.46
Foxc2Q61850 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Foxc2Q61850 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Foxc2Q61850 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxc2Q61850 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.94■□□□□ 0.46
Foxc2Q61850 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Foxc2Q61850 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxc2Q61850 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Foxc2Q61850 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Foxc2Q61850 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Foxc2Q61850 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.93■□□□□ 0.46
Foxc2Q61850 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.93■□□□□ 0.46
Foxc2Q61850 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.93■□□□□ 0.46
Foxc2Q61850 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxc2Q61850 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Foxc2Q61850 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Foxc2Q61850 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Foxc2Q61850 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Foxc2Q61850 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Foxc2Q61850 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Foxc2Q61850 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxc2Q61850 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxc2Q61850 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Foxc2Q61850 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.9■□□□□ 0.46
Foxc2Q61850 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Foxc2Q61850 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Foxc2Q61850 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxc2Q61850 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Foxc2Q61850 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Foxc2Q61850 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Foxc2Q61850 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Foxc2Q61850 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxc2Q61850 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxc2Q61850 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Foxc2Q61850 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Foxc2Q61850 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Foxc2Q61850 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Foxc2Q61850 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxc2Q61850 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Foxc2Q61850 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Foxc2Q61850 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Foxc2Q61850 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Foxc2Q61850 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.85■□□□□ 0.45
Foxc2Q61850 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Foxc2Q61850 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Foxc2Q61850 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Foxc2Q61850 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Foxc2Q61850 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.82■□□□□ 0.44
Foxc2Q61850 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxc2Q61850 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Foxc2Q61850 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxc2Q61850 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxc2Q61850 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Foxc2Q61850 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxc2Q61850 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.81■□□□□ 0.44
Foxc2Q61850 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Foxc2Q61850 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxc2Q61850 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Foxc2Q61850 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxc2Q61850 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxc2Q61850 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Foxc2Q61850 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Foxc2Q61850 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxc2Q61850 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Foxc2Q61850 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Foxc2Q61850 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Foxc2Q61850 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Foxc2Q61850 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxc2Q61850 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxc2Q61850 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Foxc2Q61850 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Foxc2Q61850 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Foxc2Q61850 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Foxc2Q61850 Gm37136-201ENSMUST00000194368 194 ntBASIC17.77■□□□□ 0.44
Foxc2Q61850 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.76■□□□□ 0.43
Foxc2Q61850 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.76■□□□□ 0.43
Foxc2Q61850 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Foxc2Q61850 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Foxc2Q61850 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.75■□□□□ 0.43
Foxc2Q61850 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Foxc2Q61850 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.75■□□□□ 0.43
Foxc2Q61850 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Foxc2Q61850 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.75■□□□□ 0.43
Foxc2Q61850 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxc2Q61850 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxc2Q61850 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Foxc2Q61850 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Foxc2Q61850 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxc2Q61850 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Foxc2Q61850 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Foxc2Q61850 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms