Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sdf4Q61112 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sdf4Q61112 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sdf4Q61112 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sdf4Q61112 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sdf4Q61112 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sdf4Q61112 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sdf4Q61112 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Sdf4Q61112 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.25■■□□□ 1.31
Sdf4Q61112 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sdf4Q61112 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Sdf4Q61112 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sdf4Q61112 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sdf4Q61112 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sdf4Q61112 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sdf4Q61112 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.23■■□□□ 1.31
Sdf4Q61112 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sdf4Q61112 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sdf4Q61112 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Sdf4Q61112 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sdf4Q61112 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.22■■□□□ 1.31
Sdf4Q61112 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sdf4Q61112 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sdf4Q61112 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.21■■□□□ 1.31
Sdf4Q61112 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sdf4Q61112 Gm4799-201ENSMUST00000095396 657 ntBASIC23.2■■□□□ 1.3
Sdf4Q61112 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sdf4Q61112 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sdf4Q61112 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sdf4Q61112 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.19■■□□□ 1.3
Sdf4Q61112 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.19■■□□□ 1.3
Sdf4Q61112 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sdf4Q61112 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sdf4Q61112 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sdf4Q61112 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sdf4Q61112 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.17■■□□□ 1.3
Sdf4Q61112 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.17■■□□□ 1.3
Sdf4Q61112 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sdf4Q61112 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sdf4Q61112 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.16■■□□□ 1.3
Sdf4Q61112 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Sdf4Q61112 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.16■■□□□ 1.3
Sdf4Q61112 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sdf4Q61112 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sdf4Q61112 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sdf4Q61112 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sdf4Q61112 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Sdf4Q61112 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Sdf4Q61112 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sdf4Q61112 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sdf4Q61112 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sdf4Q61112 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Sdf4Q61112 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sdf4Q61112 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sdf4Q61112 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sdf4Q61112 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sdf4Q61112 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sdf4Q61112 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sdf4Q61112 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Sdf4Q61112 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Sdf4Q61112 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sdf4Q61112 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Sdf4Q61112 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sdf4Q61112 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sdf4Q61112 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.11■■□□□ 1.29
Sdf4Q61112 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.1■■□□□ 1.29
Sdf4Q61112 Mir3960-201ENSMUST00000198213 73 ntBASIC23.1■■□□□ 1.29
Sdf4Q61112 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sdf4Q61112 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sdf4Q61112 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Sdf4Q61112 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sdf4Q61112 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.08■■□□□ 1.29
Sdf4Q61112 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sdf4Q61112 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sdf4Q61112 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sdf4Q61112 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sdf4Q61112 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sdf4Q61112 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.07■■□□□ 1.28
Sdf4Q61112 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sdf4Q61112 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sdf4Q61112 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sdf4Q61112 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sdf4Q61112 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Sdf4Q61112 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sdf4Q61112 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sdf4Q61112 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sdf4Q61112 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Sdf4Q61112 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sdf4Q61112 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sdf4Q61112 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sdf4Q61112 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sdf4Q61112 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sdf4Q61112 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sdf4Q61112 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.03■■□□□ 1.28
Sdf4Q61112 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sdf4Q61112 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Sdf4Q61112 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sdf4Q61112 Gm9812-201ENSMUST00000061934 968 ntBASIC23.01■■□□□ 1.27
Sdf4Q61112 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.01■■□□□ 1.27
Sdf4Q61112 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms