Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk1Q60855 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ripk1Q60855 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk1Q60855 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ripk1Q60855 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.55■■□□□ 1.04
Ripk1Q60855 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk1Q60855 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ripk1Q60855 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ripk1Q60855 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ripk1Q60855 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.54■■□□□ 1.04
Ripk1Q60855 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ripk1Q60855 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ripk1Q60855 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ripk1Q60855 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ripk1Q60855 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ripk1Q60855 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ripk1Q60855 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ripk1Q60855 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.51■■□□□ 1.03
Ripk1Q60855 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ripk1Q60855 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ripk1Q60855 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ripk1Q60855 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ripk1Q60855 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
Ripk1Q60855 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ripk1Q60855 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ripk1Q60855 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ripk1Q60855 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ripk1Q60855 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.49■■□□□ 1.03
Ripk1Q60855 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.49■■□□□ 1.03
Ripk1Q60855 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ripk1Q60855 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ripk1Q60855 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ripk1Q60855 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ripk1Q60855 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ripk1Q60855 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ripk1Q60855 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk1Q60855 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk1Q60855 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk1Q60855 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk1Q60855 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ripk1Q60855 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ripk1Q60855 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk1Q60855 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.45■■□□□ 1.02
Ripk1Q60855 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk1Q60855 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk1Q60855 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk1Q60855 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ripk1Q60855 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.44■■□□□ 1.02
Ripk1Q60855 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Ripk1Q60855 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk1Q60855 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk1Q60855 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk1Q60855 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk1Q60855 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ripk1Q60855 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk1Q60855 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ripk1Q60855 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Ripk1Q60855 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ripk1Q60855 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk1Q60855 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk1Q60855 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ripk1Q60855 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk1Q60855 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.42■■□□□ 1.02
Ripk1Q60855 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk1Q60855 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ripk1Q60855 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ripk1Q60855 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ripk1Q60855 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Ripk1Q60855 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk1Q60855 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk1Q60855 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.4■■□□□ 1.02
Ripk1Q60855 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ripk1Q60855 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ripk1Q60855 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ripk1Q60855 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ripk1Q60855 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ripk1Q60855 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ripk1Q60855 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ripk1Q60855 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ripk1Q60855 Gm7432-201ENSMUST00000210343 879 ntBASIC21.38■■□□□ 1.01
Ripk1Q60855 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ripk1Q60855 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ripk1Q60855 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ripk1Q60855 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ripk1Q60855 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ripk1Q60855 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ripk1Q60855 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ripk1Q60855 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ripk1Q60855 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ripk1Q60855 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.34■■□□□ 1.01
Ripk1Q60855 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ripk1Q60855 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.34■■□□□ 1.01
Ripk1Q60855 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ripk1Q60855 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ripk1Q60855 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms