Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-3Q5R1C3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav3-3Q5R1C3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trav3-3Q5R1C3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-3Q5R1C3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav3-3Q5R1C3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav3-3Q5R1C3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav3-3Q5R1C3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav3-3Q5R1C3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav3-3Q5R1C3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav3-3Q5R1C3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav3-3Q5R1C3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-3Q5R1C3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav3-3Q5R1C3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-3Q5R1C3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav3-3Q5R1C3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav3-3Q5R1C3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3-3Q5R1C3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3-3Q5R1C3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.09■□□□□ 0.33
Trav3-3Q5R1C3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav3-3Q5R1C3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav3-3Q5R1C3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.08■□□□□ 0.33
Trav3-3Q5R1C3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav3-3Q5R1C3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav3-3Q5R1C3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Trav3-3Q5R1C3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav3-3Q5R1C3 Peli2-204ENSMUST00000226513 1320 ntBASIC17.08■□□□□ 0.32
Trav3-3Q5R1C3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav3-3Q5R1C3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3-3Q5R1C3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3-3Q5R1C3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3-3Q5R1C3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav3-3Q5R1C3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3-3Q5R1C3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav3-3Q5R1C3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Gm8109-201ENSMUST00000194076 746 ntBASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav3-3Q5R1C3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3-3Q5R1C3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav3-3Q5R1C3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav3-3Q5R1C3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav3-3Q5R1C3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav3-3Q5R1C3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav3-3Q5R1C3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav3-3Q5R1C3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav3-3Q5R1C3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav3-3Q5R1C3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.02■□□□□ 0.31
Trav3-3Q5R1C3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav3-3Q5R1C3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav3-3Q5R1C3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav3-3Q5R1C3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3-3Q5R1C3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17■□□□□ 0.31
Trav3-3Q5R1C3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17■□□□□ 0.31
Trav3-3Q5R1C3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav3-3Q5R1C3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav3-3Q5R1C3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms