Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12253Q5NC48 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12253Q5NC48 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12253Q5NC48 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.87■□□□□ 0.77
Gm12253Q5NC48 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm12253Q5NC48 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.87■□□□□ 0.77
Gm12253Q5NC48 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm12253Q5NC48 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Gm12253Q5NC48 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.85■□□□□ 0.77
Gm12253Q5NC48 Gm16437-201ENSMUST00000025669 507 ntBASIC19.85■□□□□ 0.77
Gm12253Q5NC48 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm12253Q5NC48 Gm45364-201ENSMUST00000210883 159 ntBASIC19.84■□□□□ 0.77
Gm12253Q5NC48 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Gm12253Q5NC48 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.83■□□□□ 0.77
Gm12253Q5NC48 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm12253Q5NC48 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm12253Q5NC48 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm12253Q5NC48 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Gm12253Q5NC48 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm12253Q5NC48 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Gm12253Q5NC48 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm12253Q5NC48 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm12253Q5NC48 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.79■□□□□ 0.76
Gm12253Q5NC48 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gm12253Q5NC48 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.78■□□□□ 0.76
Gm12253Q5NC48 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12253Q5NC48 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12253Q5NC48 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12253Q5NC48 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm12253Q5NC48 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm12253Q5NC48 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm12253Q5NC48 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm12253Q5NC48 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.76■□□□□ 0.75
Gm12253Q5NC48 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm12253Q5NC48 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Gm12253Q5NC48 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.75■□□□□ 0.75
Gm12253Q5NC48 Gm12366-201ENSMUST00000121722 873 ntBASIC19.75■□□□□ 0.75
Gm12253Q5NC48 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.75■□□□□ 0.75
Gm12253Q5NC48 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.75■□□□□ 0.75
Gm12253Q5NC48 Gm5786-201ENSMUST00000085368 882 ntBASIC19.75■□□□□ 0.75
Gm12253Q5NC48 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm12253Q5NC48 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Gm12253Q5NC48 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm12253Q5NC48 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm12253Q5NC48 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm12253Q5NC48 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm12253Q5NC48 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm12253Q5NC48 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.72■□□□□ 0.75
Gm12253Q5NC48 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm12253Q5NC48 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm12253Q5NC48 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm12253Q5NC48 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm12253Q5NC48 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.7■□□□□ 0.74
Gm12253Q5NC48 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm12253Q5NC48 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm12253Q5NC48 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm12253Q5NC48 Gm9812-201ENSMUST00000061934 968 ntBASIC19.67■□□□□ 0.74
Gm12253Q5NC48 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm12253Q5NC48 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm12253Q5NC48 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm12253Q5NC48 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12253Q5NC48 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm12253Q5NC48 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 202 ms