Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.67■■□□□ 1.38
Vps13aQ5H8C4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps13aQ5H8C4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vps13aQ5H8C4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vps13aQ5H8C4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Vps13aQ5H8C4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps13aQ5H8C4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Vps13aQ5H8C4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Vps13aQ5H8C4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.64■■□□□ 1.37
Vps13aQ5H8C4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Vps13aQ5H8C4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Vps13aQ5H8C4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Vps13aQ5H8C4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vps13aQ5H8C4 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.6■■□□□ 1.37
Vps13aQ5H8C4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Vps13aQ5H8C4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Vps13aQ5H8C4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Vps13aQ5H8C4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vps13aQ5H8C4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Vps13aQ5H8C4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps13aQ5H8C4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Vps13aQ5H8C4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Vps13aQ5H8C4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.57■■□□□ 1.36
Vps13aQ5H8C4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Vps13aQ5H8C4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Vps13aQ5H8C4 Gm37136-201ENSMUST00000194368 194 ntBASIC23.56■■□□□ 1.36
Vps13aQ5H8C4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Vps13aQ5H8C4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 Gm9959-201ENSMUST00000068277 390 ntBASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vps13aQ5H8C4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Vps13aQ5H8C4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.54■■□□□ 1.36
Vps13aQ5H8C4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Vps13aQ5H8C4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.54■■□□□ 1.36
Vps13aQ5H8C4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.54■■□□□ 1.36
Vps13aQ5H8C4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps13aQ5H8C4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Vps13aQ5H8C4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vps13aQ5H8C4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.53■■□□□ 1.36
Vps13aQ5H8C4 Gm9812-201ENSMUST00000061934 968 ntBASIC23.53■■□□□ 1.36
Vps13aQ5H8C4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.52■■□□□ 1.36
Vps13aQ5H8C4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vps13aQ5H8C4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.51■■□□□ 1.35
Vps13aQ5H8C4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Vps13aQ5H8C4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.5■■□□□ 1.35
Vps13aQ5H8C4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps13aQ5H8C4 Gm43566-201ENSMUST00000196851 808 ntBASIC23.49■■□□□ 1.35
Vps13aQ5H8C4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.49■■□□□ 1.35
Vps13aQ5H8C4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vps13aQ5H8C4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Vps13aQ5H8C4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps13aQ5H8C4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
Vps13aQ5H8C4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Vps13aQ5H8C4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.47■■□□□ 1.35
Vps13aQ5H8C4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Vps13aQ5H8C4 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.47■■□□□ 1.35
Vps13aQ5H8C4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vps13aQ5H8C4 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.47■■□□□ 1.35
Vps13aQ5H8C4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Vps13aQ5H8C4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Vps13aQ5H8C4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Vps13aQ5H8C4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vps13aQ5H8C4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vps13aQ5H8C4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.43■■□□□ 1.34
Vps13aQ5H8C4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.42■■□□□ 1.34
Vps13aQ5H8C4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.41■■□□□ 1.34
Vps13aQ5H8C4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vps13aQ5H8C4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Vps13aQ5H8C4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vps13aQ5H8C4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.4■■□□□ 1.34
Vps13aQ5H8C4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms