Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.54□□□□□ -0.08
Herc2Q4U2R1 Etf1-202ENSMUST00000180351 108 ntBASIC14.54□□□□□ -0.08
Herc2Q4U2R1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herc2Q4U2R1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Herc2Q4U2R1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herc2Q4U2R1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Herc2Q4U2R1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Herc2Q4U2R1 Gm21956-201ENSMUST00000179946 522 ntBASIC14.52□□□□□ -0.09
Herc2Q4U2R1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.52□□□□□ -0.09
Herc2Q4U2R1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Herc2Q4U2R1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Gm13241-201ENSMUST00000094493 780 ntBASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc2Q4U2R1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Herc2Q4U2R1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Herc2Q4U2R1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Herc2Q4U2R1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Herc2Q4U2R1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Herc2Q4U2R1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Herc2Q4U2R1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Herc2Q4U2R1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc2Q4U2R1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Herc2Q4U2R1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Herc2Q4U2R1 Gm9812-201ENSMUST00000061934 968 ntBASIC14.47□□□□□ -0.09
Herc2Q4U2R1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.46□□□□□ -0.09
Herc2Q4U2R1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Herc2Q4U2R1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Herc2Q4U2R1 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.44□□□□□ -0.1
Herc2Q4U2R1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Herc2Q4U2R1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Herc2Q4U2R1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.44□□□□□ -0.1
Herc2Q4U2R1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Herc2Q4U2R1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Herc2Q4U2R1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Gm29257-201ENSMUST00000186115 639 ntBASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Herc2Q4U2R1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.42□□□□□ -0.1
Herc2Q4U2R1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Herc2Q4U2R1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Herc2Q4U2R1 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.42□□□□□ -0.1
Herc2Q4U2R1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.41□□□□□ -0.1
Herc2Q4U2R1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.4□□□□□ -0.1
Herc2Q4U2R1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Herc2Q4U2R1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.39□□□□□ -0.11
Herc2Q4U2R1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herc2Q4U2R1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Herc2Q4U2R1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.38□□□□□ -0.11
Herc2Q4U2R1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Herc2Q4U2R1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herc2Q4U2R1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Herc2Q4U2R1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herc2Q4U2R1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.37□□□□□ -0.11
Herc2Q4U2R1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.37□□□□□ -0.11
Herc2Q4U2R1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Gm8495-201ENSMUST00000188740 694 ntBASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.36□□□□□ -0.11
Herc2Q4U2R1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms