Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
1700012B07RikQ3V0S8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.55■■□□□ 1.04
1700012B07RikQ3V0S8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
1700012B07RikQ3V0S8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
1700012B07RikQ3V0S8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.53■■□□□ 1.04
1700012B07RikQ3V0S8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
1700012B07RikQ3V0S8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
1700012B07RikQ3V0S8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
1700012B07RikQ3V0S8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
1700012B07RikQ3V0S8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.52■■□□□ 1.04
1700012B07RikQ3V0S8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
1700012B07RikQ3V0S8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
1700012B07RikQ3V0S8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
1700012B07RikQ3V0S8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.51■■□□□ 1.03
1700012B07RikQ3V0S8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
1700012B07RikQ3V0S8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
1700012B07RikQ3V0S8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
1700012B07RikQ3V0S8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.5■■□□□ 1.03
1700012B07RikQ3V0S8 Gm45364-201ENSMUST00000210883 159 ntBASIC21.5■■□□□ 1.03
1700012B07RikQ3V0S8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
1700012B07RikQ3V0S8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
1700012B07RikQ3V0S8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.49■■□□□ 1.03
1700012B07RikQ3V0S8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
1700012B07RikQ3V0S8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.49■■□□□ 1.03
1700012B07RikQ3V0S8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.48■■□□□ 1.03
1700012B07RikQ3V0S8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
1700012B07RikQ3V0S8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
1700012B07RikQ3V0S8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.47■■□□□ 1.03
1700012B07RikQ3V0S8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.47■■□□□ 1.03
1700012B07RikQ3V0S8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
1700012B07RikQ3V0S8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
1700012B07RikQ3V0S8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.46■■□□□ 1.03
1700012B07RikQ3V0S8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
1700012B07RikQ3V0S8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
1700012B07RikQ3V0S8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
1700012B07RikQ3V0S8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
1700012B07RikQ3V0S8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
1700012B07RikQ3V0S8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
1700012B07RikQ3V0S8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
1700012B07RikQ3V0S8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.43■■□□□ 1.02
1700012B07RikQ3V0S8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.43■■□□□ 1.02
1700012B07RikQ3V0S8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
1700012B07RikQ3V0S8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
1700012B07RikQ3V0S8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
1700012B07RikQ3V0S8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
1700012B07RikQ3V0S8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
1700012B07RikQ3V0S8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
1700012B07RikQ3V0S8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
1700012B07RikQ3V0S8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
1700012B07RikQ3V0S8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
1700012B07RikQ3V0S8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
1700012B07RikQ3V0S8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.4■■□□□ 1.02
1700012B07RikQ3V0S8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
1700012B07RikQ3V0S8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
1700012B07RikQ3V0S8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
1700012B07RikQ3V0S8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
1700012B07RikQ3V0S8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
1700012B07RikQ3V0S8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
1700012B07RikQ3V0S8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
1700012B07RikQ3V0S8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
1700012B07RikQ3V0S8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
1700012B07RikQ3V0S8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
1700012B07RikQ3V0S8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
1700012B07RikQ3V0S8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
1700012B07RikQ3V0S8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
1700012B07RikQ3V0S8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
1700012B07RikQ3V0S8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
1700012B07RikQ3V0S8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
1700012B07RikQ3V0S8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
1700012B07RikQ3V0S8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
1700012B07RikQ3V0S8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
1700012B07RikQ3V0S8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
1700012B07RikQ3V0S8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
1700012B07RikQ3V0S8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
1700012B07RikQ3V0S8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
1700012B07RikQ3V0S8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
1700012B07RikQ3V0S8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.32■■□□□ 1
1700012B07RikQ3V0S8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.32■■□□□ 1
1700012B07RikQ3V0S8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.32■■□□□ 1
1700012B07RikQ3V0S8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms