Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1brtQ3UNC9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1brtQ3UNC9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cks1brtQ3UNC9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1brtQ3UNC9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1brtQ3UNC9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cks1brtQ3UNC9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cks1brtQ3UNC9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Cks1brtQ3UNC9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cks1brtQ3UNC9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1brtQ3UNC9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1brtQ3UNC9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1brtQ3UNC9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cks1brtQ3UNC9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1brtQ3UNC9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cks1brtQ3UNC9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Cks1brtQ3UNC9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cks1brtQ3UNC9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Cks1brtQ3UNC9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cks1brtQ3UNC9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1brtQ3UNC9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1brtQ3UNC9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1brtQ3UNC9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cks1brtQ3UNC9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Cks1brtQ3UNC9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.51■□□□□ 0.23
Cks1brtQ3UNC9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1brtQ3UNC9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1brtQ3UNC9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1brtQ3UNC9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1brtQ3UNC9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cks1brtQ3UNC9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cks1brtQ3UNC9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cks1brtQ3UNC9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.49■□□□□ 0.23
Cks1brtQ3UNC9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cks1brtQ3UNC9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1brtQ3UNC9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1brtQ3UNC9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1brtQ3UNC9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1brtQ3UNC9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cks1brtQ3UNC9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cks1brtQ3UNC9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 321.1 ms