Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc6aQ3UHK8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc6aQ3UHK8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc6aQ3UHK8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc6aQ3UHK8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc6aQ3UHK8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc6aQ3UHK8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnrc6aQ3UHK8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tnrc6aQ3UHK8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnrc6aQ3UHK8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnrc6aQ3UHK8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnrc6aQ3UHK8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tnrc6aQ3UHK8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnrc6aQ3UHK8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnrc6aQ3UHK8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnrc6aQ3UHK8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tnrc6aQ3UHK8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnrc6aQ3UHK8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.67■■□□□ 1.06
Tnrc6aQ3UHK8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Tnrc6aQ3UHK8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnrc6aQ3UHK8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnrc6aQ3UHK8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Tnrc6aQ3UHK8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnrc6aQ3UHK8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tnrc6aQ3UHK8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnrc6aQ3UHK8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.64■■□□□ 1.05
Tnrc6aQ3UHK8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Tnrc6aQ3UHK8 Gm10420-201ENSMUST00000121713 882 ntBASIC21.62■■□□□ 1.05
Tnrc6aQ3UHK8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnrc6aQ3UHK8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnrc6aQ3UHK8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tnrc6aQ3UHK8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnrc6aQ3UHK8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnrc6aQ3UHK8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnrc6aQ3UHK8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.61■■□□□ 1.05
Tnrc6aQ3UHK8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnrc6aQ3UHK8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnrc6aQ3UHK8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnrc6aQ3UHK8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnrc6aQ3UHK8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnrc6aQ3UHK8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnrc6aQ3UHK8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnrc6aQ3UHK8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.58■■□□□ 1.05
Tnrc6aQ3UHK8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnrc6aQ3UHK8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tnrc6aQ3UHK8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnrc6aQ3UHK8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnrc6aQ3UHK8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnrc6aQ3UHK8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 Terc-201ENSMUST00000082862 423 ntBASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnrc6aQ3UHK8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnrc6aQ3UHK8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnrc6aQ3UHK8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.55■■□□□ 1.04
Tnrc6aQ3UHK8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnrc6aQ3UHK8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnrc6aQ3UHK8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.54■■□□□ 1.04
Tnrc6aQ3UHK8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnrc6aQ3UHK8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnrc6aQ3UHK8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnrc6aQ3UHK8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tnrc6aQ3UHK8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnrc6aQ3UHK8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Tnrc6aQ3UHK8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Tnrc6aQ3UHK8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms