Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ybx1P62960 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ybx1P62960 Gm9812-201ENSMUST00000061934 968 ntBASIC23.91■■□□□ 1.42
Ybx1P62960 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ybx1P62960 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ybx1P62960 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ybx1P62960 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ybx1P62960 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.89■■□□□ 1.41
Ybx1P62960 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ybx1P62960 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ybx1P62960 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.88■■□□□ 1.41
Ybx1P62960 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ybx1P62960 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ybx1P62960 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ybx1P62960 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ybx1P62960 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ybx1P62960 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ybx1P62960 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ybx1P62960 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ybx1P62960 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ybx1P62960 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ybx1P62960 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.85■■□□□ 1.41
Ybx1P62960 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.85■■□□□ 1.41
Ybx1P62960 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ybx1P62960 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ybx1P62960 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ybx1P62960 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.84■■□□□ 1.41
Ybx1P62960 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Ybx1P62960 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.83■■□□□ 1.41
Ybx1P62960 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ybx1P62960 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.82■■□□□ 1.4
Ybx1P62960 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ybx1P62960 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Ybx1P62960 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ybx1P62960 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ybx1P62960 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ybx1P62960 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ybx1P62960 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ybx1P62960 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ybx1P62960 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ybx1P62960 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ybx1P62960 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.78■■□□□ 1.4
Ybx1P62960 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ybx1P62960 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.77■■□□□ 1.4
Ybx1P62960 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ybx1P62960 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.76■■□□□ 1.39
Ybx1P62960 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.76■■□□□ 1.39
Ybx1P62960 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.76■■□□□ 1.39
Ybx1P62960 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.76■■□□□ 1.39
Ybx1P62960 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ybx1P62960 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ybx1P62960 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ybx1P62960 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ybx1P62960 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ybx1P62960 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ybx1P62960 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.74■■□□□ 1.39
Ybx1P62960 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ybx1P62960 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ybx1P62960 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.73■■□□□ 1.39
Ybx1P62960 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.73■■□□□ 1.39
Ybx1P62960 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ybx1P62960 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ybx1P62960 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ybx1P62960 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ybx1P62960 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ybx1P62960 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ybx1P62960 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ybx1P62960 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ybx1P62960 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ybx1P62960 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ybx1P62960 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ybx1P62960 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.71■■□□□ 1.39
Ybx1P62960 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.7■■□□□ 1.38
Ybx1P62960 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.7■■□□□ 1.38
Ybx1P62960 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ybx1P62960 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ybx1P62960 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Ybx1P62960 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ybx1P62960 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ybx1P62960 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ybx1P62960 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ybx1P62960 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ybx1P62960 Terc-201ENSMUST00000082862 423 ntBASIC23.68■■□□□ 1.38
Ybx1P62960 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ybx1P62960 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ybx1P62960 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ybx1P62960 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ybx1P62960 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ybx1P62960 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ybx1P62960 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ybx1P62960 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ybx1P62960 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.66■■□□□ 1.38
Ybx1P62960 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Ybx1P62960 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ybx1P62960 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ybx1P62960 Gm10420-201ENSMUST00000121713 882 ntBASIC23.65■■□□□ 1.38
Ybx1P62960 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.65■■□□□ 1.38
Ybx1P62960 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ybx1P62960 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.64■■□□□ 1.37
Ybx1P62960 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms