Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cks1bP61025 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.16■□□□□ 0.18
Cks1bP61025 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cks1bP61025 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.16■□□□□ 0.18
Cks1bP61025 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cks1bP61025 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1bP61025 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1bP61025 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cks1bP61025 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1bP61025 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cks1bP61025 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cks1bP61025 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1bP61025 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
Cks1bP61025 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cks1bP61025 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cks1bP61025 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cks1bP61025 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cks1bP61025 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cks1bP61025 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cks1bP61025 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cks1bP61025 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cks1bP61025 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cks1bP61025 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cks1bP61025 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.11■□□□□ 0.17
Cks1bP61025 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cks1bP61025 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cks1bP61025 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1bP61025 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1bP61025 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1bP61025 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1bP61025 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cks1bP61025 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 Gm16148-201ENSMUST00000119653 893 ntBASIC16.09■□□□□ 0.17
Cks1bP61025 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cks1bP61025 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cks1bP61025 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cks1bP61025 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cks1bP61025 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cks1bP61025 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cks1bP61025 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cks1bP61025 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.08■□□□□ 0.16
Cks1bP61025 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cks1bP61025 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.07■□□□□ 0.16
Cks1bP61025 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cks1bP61025 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cks1bP61025 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.06■□□□□ 0.16
Cks1bP61025 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
Cks1bP61025 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cks1bP61025 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cks1bP61025 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.06■□□□□ 0.16
Cks1bP61025 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cks1bP61025 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Cks1bP61025 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cks1bP61025 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1bP61025 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1bP61025 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1bP61025 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cks1bP61025 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cks1bP61025 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms