Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cks2P56390 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cks2P56390 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cks2P56390 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cks2P56390 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cks2P56390 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cks2P56390 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cks2P56390 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cks2P56390 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cks2P56390 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.09■□□□□ 0.65
Cks2P56390 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cks2P56390 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cks2P56390 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cks2P56390 Gm45855-201ENSMUST00000212546 880 ntBASIC19.08■□□□□ 0.64
Cks2P56390 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cks2P56390 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks2P56390 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.07■□□□□ 0.64
Cks2P56390 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cks2P56390 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cks2P56390 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Cks2P56390 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cks2P56390 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cks2P56390 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cks2P56390 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cks2P56390 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cks2P56390 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks2P56390 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks2P56390 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks2P56390 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cks2P56390 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cks2P56390 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cks2P56390 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cks2P56390 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.03■□□□□ 0.64
Cks2P56390 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cks2P56390 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cks2P56390 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cks2P56390 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cks2P56390 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.02■□□□□ 0.64
Cks2P56390 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cks2P56390 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cks2P56390 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cks2P56390 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cks2P56390 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cks2P56390 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cks2P56390 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cks2P56390 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cks2P56390 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cks2P56390 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cks2P56390 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cks2P56390 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cks2P56390 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cks2P56390 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cks2P56390 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cks2P56390 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cks2P56390 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cks2P56390 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cks2P56390 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Cks2P56390 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cks2P56390 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cks2P56390 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.96■□□□□ 0.63
Cks2P56390 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cks2P56390 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cks2P56390 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.96■□□□□ 0.63
Cks2P56390 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cks2P56390 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cks2P56390 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks2P56390 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.95■□□□□ 0.62
Cks2P56390 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks2P56390 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.95■□□□□ 0.62
Cks2P56390 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks2P56390 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cks2P56390 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cks2P56390 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks2P56390 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cks2P56390 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks2P56390 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks2P56390 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
Cks2P56390 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cks2P56390 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.92■□□□□ 0.62
Cks2P56390 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.92■□□□□ 0.62
Cks2P56390 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cks2P56390 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cks2P56390 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cks2P56390 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cks2P56390 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cks2P56390 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cks2P56390 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cks2P56390 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cks2P56390 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cks2P56390 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms