Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29,83■■■□□ 2,37
Msh6P54276 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29,83■■■□□ 2,37
Msh6P54276 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29,82■■■□□ 2,36
Msh6P54276 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29,82■■■□□ 2,36
Msh6P54276 AC151971.4-201ENSMUST00000214717 704 ntBASIC29,81■■■□□ 2,36
Msh6P54276 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Msh6P54276 Gm37847-201ENSMUST00000192163 1497 ntBASIC29,81■■■□□ 2,36
Msh6P54276 Gm31748-201ENSMUST00000194938 1497 ntBASIC29,81■■■□□ 2,36
Msh6P54276 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Msh6P54276 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Msh6P54276 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Msh6P54276 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29,8■■■□□ 2,36
Msh6P54276 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29,8■■■□□ 2,36
Msh6P54276 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC29,8■■■□□ 2,36
Msh6P54276 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Msh6P54276 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Msh6P54276 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29,79■■■□□ 2,36
Msh6P54276 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29,78■■■□□ 2,36
Msh6P54276 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Msh6P54276 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29,78■■■□□ 2,36
Msh6P54276 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Msh6P54276 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
Msh6P54276 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29,77■■■□□ 2,36
Msh6P54276 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29,77■■■□□ 2,36
Msh6P54276 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29,77■■■□□ 2,36
Msh6P54276 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29,77■■■□□ 2,36
Msh6P54276 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29,76■■■□□ 2,36
Msh6P54276 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Msh6P54276 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Msh6P54276 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29,76■■■□□ 2,35
Msh6P54276 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29,76■■■□□ 2,35
Msh6P54276 Gm9812-201ENSMUST00000061934 968 ntBASIC29,75■■■□□ 2,35
Msh6P54276 Gm9910-201ENSMUST00000195385 1550 ntBASIC29,74■■■□□ 2,35
Msh6P54276 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29,74■■■□□ 2,35
Msh6P54276 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29,73■■■□□ 2,35
Msh6P54276 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29,73■■■□□ 2,35
Msh6P54276 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Msh6P54276 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29,73■■■□□ 2,35
Msh6P54276 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Msh6P54276 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Msh6P54276 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29,71■■■□□ 2,35
Msh6P54276 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29,7■■■□□ 2,35
Msh6P54276 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC29,7■■■□□ 2,35
Msh6P54276 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC29,7■■■□□ 2,35
Msh6P54276 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29,69■■■□□ 2,34
Msh6P54276 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Msh6P54276 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29,69■■■□□ 2,34
Msh6P54276 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29,68■■■□□ 2,34
Msh6P54276 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Msh6P54276 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Msh6P54276 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29,68■■■□□ 2,34
Msh6P54276 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC29,67■■■□□ 2,34
Msh6P54276 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Msh6P54276 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29,66■■■□□ 2,34
Msh6P54276 Gm5067-201ENSMUST00000170449 1009 ntBASIC29,66■■■□□ 2,34
Msh6P54276 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC29,66■■■□□ 2,34
Msh6P54276 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Msh6P54276 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC29,65■■■□□ 2,34
Msh6P54276 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Msh6P54276 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC29,65■■■□□ 2,34
Msh6P54276 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC29,65■■■□□ 2,34
Msh6P54276 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29,64■■■□□ 2,34
Msh6P54276 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29,64■■■□□ 2,34
Msh6P54276 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
Msh6P54276 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
Msh6P54276 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,34
Msh6P54276 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29,64■■■□□ 2,34
Msh6P54276 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29,64■■■□□ 2,33
Msh6P54276 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC29,64■■■□□ 2,33
Msh6P54276 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29,64■■■□□ 2,33
Msh6P54276 Gm5812-201ENSMUST00000061073 957 ntBASIC29,64■■■□□ 2,33
Msh6P54276 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29,64■■■□□ 2,33
Msh6P54276 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC29,63■■■□□ 2,33
Msh6P54276 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC29,63■■■□□ 2,33
Msh6P54276 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29,62■■■□□ 2,33
Msh6P54276 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29,62■■■□□ 2,33
Msh6P54276 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Msh6P54276 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC29,61■■■□□ 2,33
Msh6P54276 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29,6■■■□□ 2,33
Msh6P54276 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Msh6P54276 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29,59■■■□□ 2,33
Msh6P54276 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29,59■■■□□ 2,33
Msh6P54276 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Msh6P54276 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Msh6P54276 Gm10420-201ENSMUST00000121713 882 ntBASIC29,58■■■□□ 2,33
Msh6P54276 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Msh6P54276 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29,58■■■□□ 2,33
Msh6P54276 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29,57■■■□□ 2,32
Msh6P54276 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Msh6P54276 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29,56■■■□□ 2,32
Msh6P54276 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29,56■■■□□ 2,32
Msh6P54276 Gm5921-201ENSMUST00000075898 882 ntBASIC29,56■■■□□ 2,32
Msh6P54276 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Msh6P54276 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29,55■■■□□ 2,32
Msh6P54276 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC29,55■■■□□ 2,32
Msh6P54276 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Msh6P54276 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Msh6P54276 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29,54■■■□□ 2,32
Msh6P54276 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29,54■■■□□ 2,32
Msh6P54276 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 12,7 ms