Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccl11P48298 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccl11P48298 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.52■□□□□ 0.71
Ccl11P48298 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccl11P48298 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ccl11P48298 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccl11P48298 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccl11P48298 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ccl11P48298 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl11P48298 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccl11P48298 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl11P48298 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl11P48298 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Gm12366-201ENSMUST00000121722 873 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccl11P48298 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Gm5786-201ENSMUST00000085368 882 ntBASIC19.48■□□□□ 0.71
Ccl11P48298 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl11P48298 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl11P48298 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl11P48298 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccl11P48298 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccl11P48298 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl11P48298 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccl11P48298 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccl11P48298 Gm27502-201ENSMUST00000183495 199 ntBASIC19.44■□□□□ 0.7
Ccl11P48298 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.44■□□□□ 0.7
Ccl11P48298 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl11P48298 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl11P48298 Terc-201ENSMUST00000082862 423 ntBASIC19.43■□□□□ 0.7
Ccl11P48298 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl11P48298 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl11P48298 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccl11P48298 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccl11P48298 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl11P48298 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccl11P48298 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl11P48298 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl11P48298 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccl11P48298 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccl11P48298 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl11P48298 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl11P48298 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccl11P48298 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.37■□□□□ 0.69
Ccl11P48298 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl11P48298 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl11P48298 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl11P48298 Gm7332-201ENSMUST00000118351 454 ntBASIC19.36■□□□□ 0.69
Ccl11P48298 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccl11P48298 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.35■□□□□ 0.69
Ccl11P48298 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl11P48298 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccl11P48298 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms