Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rplp1P47955 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rplp1P47955 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rplp1P47955 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Rplp1P47955 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rplp1P47955 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rplp1P47955 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rplp1P47955 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rplp1P47955 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rplp1P47955 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rplp1P47955 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rplp1P47955 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rplp1P47955 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rplp1P47955 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rplp1P47955 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rplp1P47955 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rplp1P47955 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.65■□□□□ 0.58
Rplp1P47955 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rplp1P47955 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rplp1P47955 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rplp1P47955 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.64■□□□□ 0.57
Rplp1P47955 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rplp1P47955 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rplp1P47955 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rplp1P47955 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rplp1P47955 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rplp1P47955 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rplp1P47955 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.62■□□□□ 0.57
Rplp1P47955 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rplp1P47955 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.62■□□□□ 0.57
Rplp1P47955 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.62■□□□□ 0.57
Rplp1P47955 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rplp1P47955 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rplp1P47955 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rplp1P47955 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rplp1P47955 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.6■□□□□ 0.57
Rplp1P47955 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rplp1P47955 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rplp1P47955 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rplp1P47955 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rplp1P47955 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rplp1P47955 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rplp1P47955 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rplp1P47955 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.57■□□□□ 0.56
Rplp1P47955 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rplp1P47955 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rplp1P47955 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rplp1P47955 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rplp1P47955 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rplp1P47955 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rplp1P47955 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rplp1P47955 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rplp1P47955 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Rplp1P47955 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rplp1P47955 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rplp1P47955 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rplp1P47955 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rplp1P47955 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rplp1P47955 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rplp1P47955 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rplp1P47955 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rplp1P47955 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Rplp1P47955 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.52■□□□□ 0.56
Rplp1P47955 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rplp1P47955 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rplp1P47955 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rplp1P47955 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rplp1P47955 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rplp1P47955 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rplp1P47955 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rplp1P47955 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rplp1P47955 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 Gm37136-201ENSMUST00000194368 194 ntBASIC18.5■□□□□ 0.55
Rplp1P47955 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rplp1P47955 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rplp1P47955 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rplp1P47955 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rplp1P47955 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rplp1P47955 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rplp1P47955 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rplp1P47955 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rplp1P47955 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rplp1P47955 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rplp1P47955 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.48■□□□□ 0.55
Rplp1P47955 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rplp1P47955 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.48■□□□□ 0.55
Rplp1P47955 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rplp1P47955 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rplp1P47955 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rplp1P47955 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.47■□□□□ 0.55
Rplp1P47955 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms