Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Hist1h1dP43277 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h1dP43277 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Hist1h1dP43277 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.41■□□□□ 0.7
Hist1h1dP43277 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h1dP43277 Gm45855-201ENSMUST00000212546 880 ntBASIC19.4■□□□□ 0.7
Hist1h1dP43277 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h1dP43277 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h1dP43277 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h1dP43277 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hist1h1dP43277 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.39■□□□□ 0.7
Hist1h1dP43277 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hist1h1dP43277 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h1dP43277 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h1dP43277 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h1dP43277 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hist1h1dP43277 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h1dP43277 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.38■□□□□ 0.69
Hist1h1dP43277 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hist1h1dP43277 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist1h1dP43277 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h1dP43277 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.37■□□□□ 0.69
Hist1h1dP43277 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h1dP43277 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hist1h1dP43277 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h1dP43277 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h1dP43277 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hist1h1dP43277 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hist1h1dP43277 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h1dP43277 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h1dP43277 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h1dP43277 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h1dP43277 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Hist1h1dP43277 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1dP43277 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1dP43277 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.31■□□□□ 0.68
Hist1h1dP43277 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1dP43277 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.3■□□□□ 0.68
Hist1h1dP43277 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h1dP43277 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h1dP43277 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h1dP43277 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h1dP43277 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1dP43277 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.29■□□□□ 0.68
Hist1h1dP43277 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1dP43277 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1dP43277 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hist1h1dP43277 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1dP43277 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1dP43277 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1dP43277 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1dP43277 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1dP43277 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1dP43277 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1dP43277 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Hist1h1dP43277 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hist1h1dP43277 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1dP43277 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h1dP43277 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.25■□□□□ 0.67
Hist1h1dP43277 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.24■□□□□ 0.67
Hist1h1dP43277 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h1dP43277 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.23■□□□□ 0.67
Hist1h1dP43277 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h1dP43277 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms