Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp2P33434 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp2P33434 Gm4799-201ENSMUST00000095396 657 ntBASIC21.36■■□□□ 1.01
Mmp2P33434 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Mmp2P33434 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp2P33434 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp2P33434 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.35■■□□□ 1.01
Mmp2P33434 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.35■■□□□ 1.01
Mmp2P33434 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Mmp2P33434 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp2P33434 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Mmp2P33434 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Mmp2P33434 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Mmp2P33434 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp2P33434 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Mmp2P33434 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.33■■□□□ 1
Mmp2P33434 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Mmp2P33434 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Mmp2P33434 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.32■■□□□ 1
Mmp2P33434 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Mmp2P33434 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.31■■□□□ 1
Mmp2P33434 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.31■■□□□ 1
Mmp2P33434 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.3■■□□□ 1
Mmp2P33434 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Mmp2P33434 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Mmp2P33434 Mir3960-201ENSMUST00000198213 73 ntBASIC21.29■■□□□ 1
Mmp2P33434 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp2P33434 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Mmp2P33434 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp2P33434 Gm45364-201ENSMUST00000210883 159 ntBASIC21.28■■□□□ 1
Mmp2P33434 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.28■■□□□ 1
Mmp2P33434 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.28■■□□□ 1
Mmp2P33434 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp2P33434 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Mmp2P33434 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp2P33434 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp2P33434 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.27■■□□□ 1
Mmp2P33434 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp2P33434 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.27■■□□□ 1
Mmp2P33434 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Mmp2P33434 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp2P33434 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp2P33434 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp2P33434 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp2P33434 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp2P33434 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.25■□□□□ 0.99
Mmp2P33434 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp2P33434 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp2P33434 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.24■□□□□ 0.99
Mmp2P33434 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp2P33434 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp2P33434 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp2P33434 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp2P33434 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp2P33434 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.23■□□□□ 0.99
Mmp2P33434 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp2P33434 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp2P33434 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Mmp2P33434 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp2P33434 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.21■□□□□ 0.99
Mmp2P33434 Gm6311-201ENSMUST00000073790 878 ntBASIC21.21■□□□□ 0.99
Mmp2P33434 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp2P33434 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.21■□□□□ 0.99
Mmp2P33434 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Mmp2P33434 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Mmp2P33434 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.2■□□□□ 0.98
Mmp2P33434 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.2■□□□□ 0.98
Mmp2P33434 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp2P33434 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp2P33434 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp2P33434 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp2P33434 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.19■□□□□ 0.98
Mmp2P33434 Gm9812-201ENSMUST00000061934 968 ntBASIC21.19■□□□□ 0.98
Mmp2P33434 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp2P33434 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp2P33434 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Mmp2P33434 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp2P33434 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.18■□□□□ 0.98
Mmp2P33434 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp2P33434 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.18■□□□□ 0.98
Mmp2P33434 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp2P33434 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mmp2P33434 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mmp2P33434 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp2P33434 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mmp2P33434 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Mmp2P33434 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp2P33434 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.16■□□□□ 0.98
Mmp2P33434 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.16■□□□□ 0.98
Mmp2P33434 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mmp2P33434 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Mmp2P33434 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp2P33434 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mmp2P33434 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms