Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PdgfbP31240 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfbP31240 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.75■■□□□ 1.39
PdgfbP31240 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PdgfbP31240 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PdgfbP31240 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.74■■□□□ 1.39
PdgfbP31240 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.74■■□□□ 1.39
PdgfbP31240 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.73■■□□□ 1.39
PdgfbP31240 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PdgfbP31240 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfbP31240 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfbP31240 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PdgfbP31240 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.71■■□□□ 1.39
PdgfbP31240 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Terc-201ENSMUST00000082862 423 ntBASIC23.69■■□□□ 1.38
PdgfbP31240 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfbP31240 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PdgfbP31240 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.68■■□□□ 1.38
PdgfbP31240 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
PdgfbP31240 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfbP31240 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PdgfbP31240 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PdgfbP31240 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PdgfbP31240 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.65■■□□□ 1.38
PdgfbP31240 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfbP31240 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PdgfbP31240 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.64■■□□□ 1.37
PdgfbP31240 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PdgfbP31240 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PdgfbP31240 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PdgfbP31240 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PdgfbP31240 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.63■■□□□ 1.37
PdgfbP31240 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.62■■□□□ 1.37
PdgfbP31240 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PdgfbP31240 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PdgfbP31240 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.62■■□□□ 1.37
PdgfbP31240 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
PdgfbP31240 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PdgfbP31240 Gm13238-201ENSMUST00000117655 780 ntBASIC23.61■■□□□ 1.37
PdgfbP31240 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PdgfbP31240 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Gm15820-201ENSMUST00000201566 728 ntBASIC23.6■■□□□ 1.37
PdgfbP31240 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfbP31240 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.59■■□□□ 1.37
PdgfbP31240 Rps24-207ENSMUST00000224568 714 ntBASIC23.59■■□□□ 1.37
PdgfbP31240 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PdgfbP31240 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfbP31240 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PdgfbP31240 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
PdgfbP31240 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
PdgfbP31240 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
PdgfbP31240 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.57■■□□□ 1.36
PdgfbP31240 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.57■■□□□ 1.36
PdgfbP31240 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.56■■□□□ 1.36
PdgfbP31240 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfbP31240 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.56■■□□□ 1.36
PdgfbP31240 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PdgfbP31240 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.55■■□□□ 1.36
PdgfbP31240 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.55■■□□□ 1.36
PdgfbP31240 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
PdgfbP31240 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PdgfbP31240 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PdgfbP31240 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PdgfbP31240 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PdgfbP31240 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PdgfbP31240 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PdgfbP31240 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfbP31240 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PdgfbP31240 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfbP31240 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfbP31240 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PdgfbP31240 Gm14117-201ENSMUST00000122417 843 ntBASIC23.49■■□□□ 1.35
PdgfbP31240 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
PdgfbP31240 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.48■■□□□ 1.35
PdgfbP31240 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Gm43566-201ENSMUST00000196851 808 ntBASIC23.48■■□□□ 1.35
PdgfbP31240 Gm45102-201ENSMUST00000207427 857 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms