Protein–RNA interactions for Protein: P27545

Cers1, Ceramide synthase 1, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cers1P27545 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cers1P27545 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cers1P27545 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Cers1P27545 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cers1P27545 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.32■■□□□ 1
Cers1P27545 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cers1P27545 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cers1P27545 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cers1P27545 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Cers1P27545 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cers1P27545 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cers1P27545 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.29■■□□□ 1
Cers1P27545 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cers1P27545 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cers1P27545 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cers1P27545 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Cers1P27545 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cers1P27545 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cers1P27545 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cers1P27545 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.27■■□□□ 1
Cers1P27545 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cers1P27545 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cers1P27545 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cers1P27545 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.26■□□□□ 0.99
Cers1P27545 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cers1P27545 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cers1P27545 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cers1P27545 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cers1P27545 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cers1P27545 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cers1P27545 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.24■□□□□ 0.99
Cers1P27545 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cers1P27545 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cers1P27545 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cers1P27545 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cers1P27545 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cers1P27545 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cers1P27545 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cers1P27545 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cers1P27545 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cers1P27545 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cers1P27545 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cers1P27545 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cers1P27545 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cers1P27545 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cers1P27545 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cers1P27545 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cers1P27545 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cers1P27545 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cers1P27545 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cers1P27545 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cers1P27545 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cers1P27545 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cers1P27545 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.18■□□□□ 0.98
Cers1P27545 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cers1P27545 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cers1P27545 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cers1P27545 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cers1P27545 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.15■□□□□ 0.98
Cers1P27545 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cers1P27545 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cers1P27545 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.14■□□□□ 0.98
Cers1P27545 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.14■□□□□ 0.98
Cers1P27545 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Cers1P27545 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cers1P27545 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cers1P27545 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cers1P27545 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.13■□□□□ 0.97
Cers1P27545 Gm37136-201ENSMUST00000194368 194 ntBASIC21.13■□□□□ 0.97
Cers1P27545 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cers1P27545 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cers1P27545 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cers1P27545 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cers1P27545 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.12■□□□□ 0.97
Cers1P27545 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cers1P27545 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cers1P27545 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cers1P27545 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.11■□□□□ 0.97
Cers1P27545 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cers1P27545 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cers1P27545 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cers1P27545 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cers1P27545 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cers1P27545 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cers1P27545 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cers1P27545 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cers1P27545 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cers1P27545 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cers1P27545 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.09■□□□□ 0.97
Cers1P27545 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cers1P27545 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cers1P27545 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cers1P27545 Gm6311-201ENSMUST00000073790 878 ntBASIC21.08■□□□□ 0.97
Cers1P27545 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.07■□□□□ 0.96
Cers1P27545 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.07■□□□□ 0.96
Cers1P27545 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cers1P27545 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cers1P27545 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cers1P27545 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cers1P27545 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms