Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col8a2P25318 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.32■□□□□ 0.68
Col8a2P25318 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col8a2P25318 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Col8a2P25318 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col8a2P25318 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col8a2P25318 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col8a2P25318 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col8a2P25318 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col8a2P25318 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col8a2P25318 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col8a2P25318 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col8a2P25318 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col8a2P25318 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.29■□□□□ 0.68
Col8a2P25318 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col8a2P25318 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.28■□□□□ 0.68
Col8a2P25318 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col8a2P25318 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
Col8a2P25318 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col8a2P25318 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.27■□□□□ 0.68
Col8a2P25318 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col8a2P25318 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.26■□□□□ 0.67
Col8a2P25318 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Col8a2P25318 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col8a2P25318 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col8a2P25318 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col8a2P25318 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.25■□□□□ 0.67
Col8a2P25318 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col8a2P25318 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col8a2P25318 Gm9806-201ENSMUST00000051080 552 ntBASIC19.24■□□□□ 0.67
Col8a2P25318 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Col8a2P25318 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col8a2P25318 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col8a2P25318 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
Col8a2P25318 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.23■□□□□ 0.67
Col8a2P25318 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col8a2P25318 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col8a2P25318 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col8a2P25318 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.22■□□□□ 0.67
Col8a2P25318 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col8a2P25318 Gm27502-201ENSMUST00000183495 199 ntBASIC19.22■□□□□ 0.67
Col8a2P25318 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
Col8a2P25318 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col8a2P25318 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col8a2P25318 Cap2-205ENSMUST00000225824 1634 ntBASIC19.22■□□□□ 0.67
Col8a2P25318 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Col8a2P25318 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Col8a2P25318 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 Mir6538-201ENSMUST00000183713 110 ntBASIC19.21■□□□□ 0.67
Col8a2P25318 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col8a2P25318 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col8a2P25318 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Col8a2P25318 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col8a2P25318 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col8a2P25318 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col8a2P25318 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col8a2P25318 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col8a2P25318 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Col8a2P25318 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col8a2P25318 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col8a2P25318 Gm11687-201ENSMUST00000118911 886 ntBASIC19.18■□□□□ 0.66
Col8a2P25318 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col8a2P25318 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col8a2P25318 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.18■□□□□ 0.66
Col8a2P25318 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col8a2P25318 Gm9812-201ENSMUST00000061934 968 ntBASIC19.17■□□□□ 0.66
Col8a2P25318 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.17■□□□□ 0.66
Col8a2P25318 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col8a2P25318 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col8a2P25318 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.16■□□□□ 0.66
Col8a2P25318 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.16■□□□□ 0.66
Col8a2P25318 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Col8a2P25318 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col8a2P25318 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col8a2P25318 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.15■□□□□ 0.66
Col8a2P25318 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col8a2P25318 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col8a2P25318 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.15■□□□□ 0.66
Col8a2P25318 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col8a2P25318 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col8a2P25318 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Col8a2P25318 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col8a2P25318 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col8a2P25318 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col8a2P25318 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col8a2P25318 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.11■□□□□ 0.65
Col8a2P25318 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Col8a2P25318 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Col8a2P25318 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Col8a2P25318 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col8a2P25318 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms